Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38196 |
Symbol | |
ID | 7203089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | - |
Start bp | 302488 |
End bp | 303249 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182365 |
Protein GI | 219124132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.991626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAC GTCCCAAAAT TTTGCTGTTA GGTGACTCTC TCACGCAGAC GTCCTTCGAA GGATGGAGTG GAAAACTTGC GGACGTCTTT CAACGACGTG CTGACGTCGT TAACCGCGGA TACTCTGGTT ACAATACAGA ATTCTACCTT CACTTGGACA CAGTGTGGAA CGAGTTGTTA GTAAACGTCC AGTTGGCAGT TGTCTGGTTC GGCGCAAACG ACGCGGGGCT GCCTGACTTG GCCGCCCATC ACCACGTTCC ATTGGAACGA TATCGAGAAA ATTTGAACAC AATTCTCAAT CGCCTTCAAG TTCAATTTAA GCCACCACGA ATTATTCTTA TCACACCGCC ACCAGTCCAT CACGAGCAGC GGCTAGCGCA CCAAGTGCAA CGTTATGGCG AGAAAGCAAC GGGAGAGCTG GAACGAACTC TTGAGCAAAC AAGAAAATAC GCTTTGGCCT GCCAACGGGT CGCCTCAGAA AAAAAATTGC CCTGTTTAAA CTTATTCGAC CTGATGCATT CTGAAGCCGA CTTTGGTCGA TTCTTCCACG ACGGTCTTCA TTTTTCCAAA AAAGGACACG AATTCGTTGC AAACGCACTA CTACGCGCTA TCCAGGAGCA TTTTGCGTCA TTTGCTGTGG TTCCAGATCC GTACACAAGC CAATGGTGCA ACTCGGGCTC ACATTGTGAG TCACTCTCAT CCCAAGGTCC GTATCATGAC CAAATTGACC ACTCAGATAT CGGGAAAGCG TTCCCCCTGT AA
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Protein sequence | MTTRPKILLL GDSLTQTSFE GWSGKLADVF QRRADVVNRG YSGYNTEFYL HLDTVWNELL VNVQLAVVWF GANDAGLPDL AAHHHVPLER YRENLNTILN RLQVQFKPPR IILITPPPVH HEQRLAHQVQ RYGEKATGEL ERTLEQTRKY ALACQRVASE KKLPCLNLFD LMHSEADFGR FFHDGLHFSK KGHEFVANAL LRAIQEHFAS FAVVPDPYTS QWCNSGSHCE SLSSQGPYHD QIDHSDIGKA FPL
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