Gene PHATRDRAFT_38174 details

Gene Information

• Locus tag: PHATRDRAFT_38174
• ID: 7202985
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: -
• Start bp: 248531
• End bp: 250696
• Gene Length: 2166 bp
• Protein Length: 721 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002182355
• Protein GI: 219124111

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.949545
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCCCA GCACCGATAG TAGCAACACC GGGAATGTCG CTGCCAGCAC AACTGCCGAG 
AACGCCACTG ACGCTGCCGT GGATAATACC GTGCCCATTC CTCGCCAGTC TTCCATGGGC 
AGCACGGCGT CCGTTTCGGG GCGCTACGAA ACCTTCACGG AAGCCGTTCC GCTCTCACTG 
AGTTCCATGG CACACGCATC GTTGCCTCTC GAAGACGGCG TCTTGGACGG AATCCAGCAA 
GTTTTGTCGC ACACGCTGCT GTGCTGCGTC AACTACGCCC GTATCGTCCA CGCCCCGCAC 
CAGTGGAGTT TTCGCGATCT CTGCACTTCG GCGTACGCCT GGGAACCGCA ACGGCGGGAC 
GGGGCCGTTC CGCAGGATTT GCCCTACTCG CTGGAAAAAC TCTCCTTCCG ACACCAGTAC 
GTGCGCAGCG CGTGTATTTC GTTGGGGACC CGGGGCCTGC CGAGGGATCC CCAAGCGGCA 
CTGGAACTCG AACAGCAACA CGACTGGACG ACACAGAATG CTTGGATACT AGGGAAAGTT 
AGTCTTCTGT ACGCATCCAC CGAACGACTT ACTCCCGGGG AATTGGATGG GACGGATGTG 
GAAGACATGC CACCCACCAT CCTCTACAAG GCGGTGGTGG AATACCGGAG TTTGCCCGCC 
ACCGGCAATC AACAAGCCGT GCAGGCGGAA GAATTGTCCA TGCTCAGTTT CGGGGGTGCC 
GTGGACGACG ACGTCAAGTT CGGCGCACTC GCCGCCCTCT ACGACGAAAC GGCCAAGTAC 
GTTCTCGAGA TTTATTCCGT CCGCGGCAAA AAGTACAAAT TCGATCTCAT GGATTCTACC 
CTGTCCAACG GGACGACCCC GAGCTTGCCG GCCTCCTGCG CCGGCGATCC GTTCGTGAAA 
TCCTTGTGTG CCACTGTTAC GGACCACGCG GACGGCAATC AACGAGATCC ACAAGCGCAG 
GCCGACCAAG CCGAAGAGAA AGCAAAGAAC TCGTCTTTGA GTAAGAAATT TCCATTCGCT 
ATTACCCGCA TCCATTTGAC GTTGGAAGGG AAACCGCGGG CAGGCAACGA ATTGACGAAT 
CTGCCGAGTT TTGATTTCCT GACCGAGGCG ATTAAAGCCA ATTTTCTCAT GCTCAATCCA 
GACCCGCCTG CCATGGTGAC ATGTATGCCA TCCGGACATA CGCTACTGTT GGATCCTGAC 
ATGGCCGGAC GGATTTTTGT CAATGGCCGC TACGTGACGA CGTGGGGTTT GGACAGTCGG 
ATTGGTTCCA GCGGAACTGC CCTGTTCGGA ATGGACCTGC ACTCCATCCC CTTTTGGCAC 
GGGAAAATTG TCGATTACGA AGTCATGAAG ACTGCGTGTG CCCAAATGTG GCACGAAGTT 
CTTGTTGACG CTCGTTTGGC ACCGCTGAAC ATTGCCTCGC GTCTTTTGAA TCGACTCCTA 
TATGGACGAG ATCCGCACAT GGGAAGCAAC AAGAACAGTG ATGATGATGA CGATAGCTAC 
GACGACGATG ACACTAACGA TGGCACGTTG CAAGATACGG CGACCGACTG TTTGGAATCC 
CAAGTCCTAT CGTCGCCGCA CTACGACAAG GTAGGAATTG CCCCCAAGGC ACTGGCCACA 
AGATTTCATG CAGAATTTGG GGAATTGGCC TATCCTTGTC AGGCCCACGA AATGGAATGG 
GTCAAGGCGG CTTTGCCGGG TGTCGTACCG GTCCTAGCGC CACTCCGTTT GCTCAAGATA 
TTGCGGCGAG GAGGCATCAT GGATGTACAA CAAACTGCCG ACAACTTGTG GTTTGCCGAA 
TGCCGACCGG CCAAAGAAGG GGCAGAGACG CAATTGATCC AGTCAGCTTT GACCTTACTG 
AGAGCGGCAG AATGCGACGA TGTCAAGTTC GAAAACGTAG CCTTTGTCTC GAGCAGAGTG 
GCGAACGACG TGGTCATGAA AAACGCCGTG TGTCGATACA ACGAAATGCG TCATCAATTT 
TCGGTTCATG AATCCTTTGT GAACTTGGCC GTTGCCGATT ACGGCGGGCC TGTAGTTGGT 
GATGAGGTAT CGGACGCCAA AGTACGAGCC TATTTGTTGG GTATGTACGT GGCAAAGGAG 
CATCCGGACG GTGAGCTACT GCCTCGGTAC TTGTTAAGAC ACAATCCATA TATTGAACGA 
GCTTAG 

 

Protein sequence

MLPSTDSSNT GNVAASTTAE NATDAAVDNT VPIPRQSSMG STASVSGRYE TFTEAVPLSL 
SSMAHASLPL EDGVLDGIQQ VLSHTLLCCV NYARIVHAPH QWSFRDLCTS AYAWEPQRRD 
GAVPQDLPYS LEKLSFRHQY VRSACISLGT RGLPRDPQAA LELEQQHDWT TQNAWILGKV 
SLLYASTERL TPGELDGTDV EDMPPTILYK AVVEYRSLPA TGNQQAVQAE ELSMLSFGGA 
VDDDVKFGAL AALYDETAKY VLEIYSVRGK KYKFDLMDST LSNGTTPSLP ASCAGDPFVK 
SLCATVTDHA DGNQRDPQAQ ADQAEEKAKN SSLSKKFPFA ITRIHLTLEG KPRAGNELTN 
LPSFDFLTEA IKANFLMLNP DPPAMVTCMP SGHTLLLDPD MAGRIFVNGR YVTTWGLDSR 
IGSSGTALFG MDLHSIPFWH GKIVDYEVMK TACAQMWHEV LVDARLAPLN IASRLLNRLL 
YGRDPHMGSN KNSDDDDDSY DDDDTNDGTL QDTATDCLES QVLSSPHYDK VGIAPKALAT 
RFHAEFGELA YPCQAHEMEW VKAALPGVVP VLAPLRLLKI LRRGGIMDVQ QTADNLWFAE 
CRPAKEGAET QLIQSALTLL RAAECDDVKF ENVAFVSSRV ANDVVMKNAV CRYNEMRHQF 
SVHESFVNLA VADYGGPVVG DEVSDAKVRA YLLGMYVAKE HPDGELLPRY LLRHNPYIER 
A