Gene PHATRDRAFT_38166 details

Gene Information

• Locus tag: PHATRDRAFT_38166
• ID: 7203076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 231611
• End bp: 232327
• Gene Length: 717 bp
• Protein Length: 238 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002182183
• Protein GI: 219123753

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.949069
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGGCG AACGGTGGGG TGATTCCACT TCGGAGGACG AACTGGACCT CAGGATTACT 
GAGCCCGTCC ATACGGGTCT TAACGACGGT ACCATTTCAA CACAATCACT CTTGGATCCT 
ATACCTCAGG GAGCCAAGGT AACTGTTCCT CCAAGTCGCT ACAGCGCCGA AGCTGAGGAA 
GATGACGGGA ACGATGAGCA CAGTGAAATG GAGGAAGAGG AAGAGTCCTC CGACGACGAG 
GAAGACCCCA AAGAGCGTGA GCGGCGACTG GTAGCCGCTC GGGAATTGGC GCAGCAAAAG 
AAGGAAGAAA AGAAAAAGAA GCAGGAATCT TTGAACGACC AGCTGGACGA CCTGGACGAC 
ATTCTCAACG AACTTGGCAT TGAAGCCAAG GTTGTAGAGG AAGAGAGTGG AGTTGACGCT 
ACAACTGAAG ATGTAGCCGT GAGCTCTGGC GCAAACAGTA AGCGAAGAAA AAAGAAGAAA 
AAGAAGGGAG AAGGTAGTGC CCCTGCTTCT GCTGAACAGC AGGAAGAGAC CAAAGTTGAA 
GAAGCAGCAG CTGCCGATAT TTCAACAGTG CTCAAGGCCA AGGCCAAGCG CAAAAGTAGC 
AAGTCCGCTT CTTCTACCAG TGCAGCAGTT GCAGCAGCGA AGGAAACTAG CGAGGCCAAG 
AAAGGACTGG AAGTAAAGAA GAAAAAGAAA AAGAAAGACC TTCACTTCCC TCGGTAA 

 

Protein sequence

MSGERWGDST SEDELDLRIT EPVHTGLNDG TISTQSLLDP IPQGAKVTVP PSRYSAEAEE 
DDGNDEHSEM EEEEESSDDE EDPKERERRL VAARELAQQK KEEKKKKQES LNDQLDDLDD 
ILNELGIEAK VVEEESGVDA TTEDVAVSSG ANSKRRKKKK KKGEGSAPAS AEQQEETKVE 
EAAAADISTV LKAKAKRKSS KSASSTSAAV AAAKETSEAK KGLEVKKKKK KKDLHFPR