Gene PHATRDRAFT_38149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38149 
Symbol 
ID7203071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp193859 
End bp194893 
Gene Length1035 bp 
Protein Length344 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182173 
Protein GI219123732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACTCT TTACTATCTA CTTGCTCTCG GCAGCGATGC CGAGTGCCGC TTTTTCCGTT 
CAGCGCCCAC AGTTGAGGAC CCCTAGTGCG ACGGTGTCGT CTCGCATACT GCGCAACAAG
TACGACAGTG TCACAAGTCT CCATGAAAGC GAAAGCGGCA CCGAAACCAC CGCGACTAGT
AGCAGCGCTT CCTCATCGTC TCGCGGGCTA TCCATTCCAC TTTCGTGGGA AGAAATGGTA
CGCCAGGTCG CTTCGGCAAT GAAGGAGGCA TCTGAAAAGG GCACATCTCG TCAGATTGTC
CGGGTCTTGT TACCGCGGGA TAGTTCCTCC GATGATCTCG GAAAATATAT CGAAGAAGGC
TTCGAAAACA GCAATAGTAA GGGTGAGATT GCGCTCGTGC CTCCGGACGA GTCCTGGCAA
GGCGGTATCA TGCAATTGTA CCGGGCCGCG GCTCCGACAG CCTCCGAAAT TGTGCGGACG
CTCACCTCCA CAAGTAGTTT GCCGTCCCGA ATTTCCGAAG ATCGGAGTGT GGATGAGTCC
GGTGTAGACG GAGTGGGGTT GTTACAGACC GAAGACCAAT CCGTCAATTT GTGGGTGCAG
CCGACGCAGG AATGTGTAGA TGGTATGGTA AAAATGTCGG AACAGGTGGA TGCCAATAAA
TTGGTTGTCT TGCTCAATCC GCAGTGGCGC CAAGTTGACG ATGCCTTGGA TGCGCAGTCA
AAGGGTGAAG GGTTCATGTC TACCTTGGCC TCGTTTCTGG GTGGAAAGGG TGGAACTCTT
AAACAATTGG CAGAAGCAGG ATATCAACCA GTATACACGT TGGAAGGGTA CGTATGCCGG
GGATCCAATG TGCGGTTACT TCAGGTCTTA GACTCGCCTT GGACTGTCTT TTGTGAGCGG
GACAATCAAG AGTCGTACAT CCAAGTCGGC ACTAGTGAAG CCCGACCGAC CTACCAGCAA
GTGGAAGTCA TGTTGCAGGA TTCCGATATT GGTTACAAGT ATGCGCGTGA TATGGGATGG
CAAGAAAAAC TGTAA
 
Protein sequence
MRLFTIYLLS AAMPSAAFSV QRPQLRTPSA TVSSRILRNK YDSVTSLHES ESGTETTATS 
SSASSSSRGL SIPLSWEEMV RQVASAMKEA SEKGTSRQIV RVLLPRDSSS DDLGKYIEEG
FENSNSKGEI ALVPPDESWQ GGIMQLYRAA APTASEIVRT LTSTSSLPSR ISEDRSVDES
GVDGVGLLQT EDQSVNLWVQ PTQECVDGMV KMSEQVDANK LVVLLNPQWR QVDDALDAQS
KGEGFMSTLA SFLGGKGGTL KQLAEAGYQP VYTLEGYVCR GSNVRLLQVL DSPWTVFCER
DNQESYIQVG TSEARPTYQQ VEVMLQDSDI GYKYARDMGW QEKL