Gene PHATRDRAFT_38112 details

Gene Information

• Locus tag: PHATRDRAFT_38112
• ID: 7203050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 101823
• End bp: 103862
• Gene Length: 2040 bp
• Protein Length: 679 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002182157
• Protein GI: 219123699

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.189423
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTCT CTCTCGCCAT TGCAACACTC GCCCTTTCTG CTCAGACAAG CATTGCTGTT 
CTCCGGAACG GCGCATTGTC AACGGATGTC TTCATCCCTA CTAAGATTTC GTACCTGGCT 
CTCGTGGATG ATTCCTCCTT CACGGAGTCT ATCAAAAAGT CTATGATGGA CGCCCTTCAA 
GAATCTGGTA TGGTGTCGAT CACTGACATT CCTGGAAAAC AAGTCAAGGA TAAAGCCCTC 
TCTTGGGACC TTCAAGCCTG TCTCCAAGAT TCTGAGGCCG CCAAGGAGCA TACCTTCCAG 
GATGGAACAG TTCGCCGTAC ACTTGCTACA CATACCGTAC CAGGTGGAGC CCAGAACATC 
GATCATCGCT CGGAATCGCC TTCTTGCGAG GCCTTCTCAA AAGCTGTCGA CGACTTTCGT 
TCGAGTTCTG CCCAAGCCAC TCAAGCTTTT GCCAAGCGAC TTGGAAGCCT ATTGGAAGAA 
TCTGAAGATG TCCATCAAGA TGGAGCCCTT CTTTCAACAG CTGAAGGATA TGAATTTTCG 
GCGTTCTCTG ACGTAGTGGA GAATGGGGAG CATTTGGAAC ATTTTCATTC CTACCAGAAA 
AACTCCAACC AGGCTTCTGA AGAAACCGTC GCCTATCACA CAGATCAAGG CCTCTTTATT 
GCCTTTACAC CTGGGCGTAT GGTGCGGGAC CAGCCCGGTC ATGTCGAGAT CTCTACCGGG 
TTCTTCATTG AACTTCCAAG TGGAGCACGT GTTCACGTCA AATTTGATGA AAACGATGAT 
CTAGTTTTTA TGCTCGGAGA TGGCGTGAAC CAGTACGTGA ACCCCATGCT CCTCGACAAG 
ACCCATGCTG CCGTCACCTT GTTACGAGCA ACCCCCCATG CCTTGACTAT GCCCGAACAC 
TCGAAAAATG TAGCTCGTGT CTGGTACGGA CGCATGGTTC TTCCGCCCGC GTCAGCTCTT 
CACCCCAAAC ATGGAAAATC TTTCGGGCTT CTCCGAGAAG AAATGATCGA CGCATCTATC 
AACAATAATA ATGAGCATGC TCTTAGTTTT GGGTGCTCTT CCTCTTCCAT GACTGCCCGT 
CAACTTGAAG AGACATCCTG CGAAGAGGGT ACCTTGCTAT GCTGGCATCG CTGCATGGAC 
ATTGCAGAGG CTGGCGTGAG CCAAGAAATT TGCGCAGCCC AAAGCCTTGA CCTGCAGTGC 
ATCAACCCTC GTGGACAACT CTGGGACAAC ACCCACGGTG ACTTCTTCCC TGGTTGCGCA 
GATGCCAATA GCACGGAATT GAATACTCCC TATCCATCCC TACCTGGAAT TCCTCGAGAC 
AATGGAACCT GCTCTACCGA GGAATGGGAC GCGTTTGTCT CATCCGCAAA TTTCAACAAC 
TCATTTGAAG TGGGTAAGAA TGGAATCTTT ATGTGGGACG TTCTCGAAAG TGGCCAAATC 
AAGGGAAGAC TCGCCTATAA TGGCTTGCTT GGATATCTCG CGTTTGGCTT TGCGAACGTT 
GGGGGAAGTA AGAACGGAAT GCACGGCGCT ACAATTCTAT TGGCAATCCC TGGCGATAAC 
TATACTGCCA CTGATGGGTT CGAGTTGGAC GCTGGGCCCT CGGTTCAGGA ATTCGTCATC 
AGCCCTGATC CTGCCAAGAG CTCGTTTCGC TTTTGGATGG ATCCAGTCAA CGATTTTGTC 
GCAACGGCTC GCCAGAGTTC GGAAATTGAT TCTCGTAGTG TTGAGTCTAC CGAGTGTTTC 
ACTGCTCTCA CCTTCCAAGC CACCTCTATC AATGGTATTC CCTTCGATCT CGAGGGAACG 
GACGAGCTAA TTTGGGCCGC CAATGGTCAA GACTTCTTTG CAGGGTATCA TGGGCCTGAC 
GATCGTTCGC GTTTCTCAAT CGACTGGTCT ACCGGGGAGG CCTTGGCGAA TACTGGAGAG 
ACGGCCCCGC CTCCACCGGA AGAGGGAGAT CCTGCCGAAA CGTCTTCGGG ATCTTTCTAT 
GTATCCAAAA CTGGTATCGC TTTAGTTGCA GCACTCATCT CCATTGCTGA CTTCATTTAA 

 

Protein sequence

MNLSLAIATL ALSAQTSIAV LRNGALSTDV FIPTKISYLA LVDDSSFTES IKKSMMDALQ 
ESGMVSITDI PGKQVKDKAL SWDLQACLQD SEAAKEHTFQ DGTVRRTLAT HTVPGGAQNI 
DHRSESPSCE AFSKAVDDFR SSSAQATQAF AKRLGSLLEE SEDVHQDGAL LSTAEGYEFS 
AFSDVVENGE HLEHFHSYQK NSNQASEETV AYHTDQGLFI AFTPGRMVRD QPGHVEISTG 
FFIELPSGAR VHVKFDENDD LVFMLGDGVN QYVNPMLLDK THAAVTLLRA TPHALTMPEH 
SKNVARVWYG RMVLPPASAL HPKHGKSFGL LREEMIDASI NNNNEHALSF GCSSSSMTAR 
QLEETSCEEG TLLCWHRCMD IAEAGVSQEI CAAQSLDLQC INPRGQLWDN THGDFFPGCA 
DANSTELNTP YPSLPGIPRD NGTCSTEEWD AFVSSANFNN SFEVGKNGIF MWDVLESGQI 
KGRLAYNGLL GYLAFGFANV GGSKNGMHGA TILLAIPGDN YTATDGFELD AGPSVQEFVI 
SPDPAKSSFR FWMDPVNDFV ATARQSSEID SRSVESTECF TALTFQATSI NGIPFDLEGT 
DELIWAANGQ DFFAGYHGPD DRSRFSIDWS TGEALANTGE TAPPPPEEGD PAETSSGSFY 
VSKTGIALVA ALISIADFI