Gene PHATRDRAFT_38086 details

Gene Information

• Locus tag: PHATRDRAFT_38086
• ID: 7202946
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 31993
• End bp: 33969
• Gene Length: 1977 bp
• Protein Length: 658 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002182147
• Protein GI: 219123678

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCTTTT ATTCCTGGTT TGGATCAACG GCGGCTCGAG CGCACCGTCA CTTTCCCGCA 
CTACCGGAAC CACTAGACGA CGCCGTAGCC ATACACGACG AGCACCAATC CTCTTCCGGT 
TCCTGCAAGG ACGACCCGCC AGATATTCCG GTACGGAAGA ATGACGAAAC GTGTGTACGT 
ACCGCCGTCC ATTCGATCAC GATTCCGAAA TGGGACGCTC CGCTCCAATC GGCAGCCCAC 
GAACCGTCAC TGCACAATCT CGACAATCCG GACCAAAGTG CGCACCAAAC AGACAATAGC 
GTCACCTCTT GGTGCCGTCA GCACGTACCT TCCGGTGCTT CTTGGAACGG TAGGGCTAGT 
TGCCGTCACC AGCAGTACAT CACCAATCGA CAGCAACTCC TAACGGAAGA CGAAGAAACG 
GATTCGTTGT TTCCTTTACA CACGATTCCG TTCGTCTCTA TTGAACTGCG CTTGGAACCC 
ACCGATCACA GTGACGACGA TGACGACGAC GATGACCTCT TTGGATGTCC TCCCCACGGA 
CCCCGGACTC GTCAAGCCTA CACGTCATGG GACGCGCCAG ATATTGCTGC AGACGTCGTC 
TCGGCGACAC CATCCGATCC ACCCCAACGC ACGGGTCAAA TTCGAATAGG CGGAACAAAG 
TCGATAGAAT TTCCGGACGC TCTGCCAAGT CGTCTTGACG AGACTGTCCA TTTATACAAC 
GCGAGTCAAG GGTGCCATGC CGACTCACCG CCCGCGCAAT TCGTCTCGAC CATCCCGGCG 
CATTTTGCAG TCCCCGTCGA AATTACTGTC GTTCCGAACC ACGATCCAGG AAATTGCAGA 
AAGGATCAGG CCAGCTACAA TGTCTGCTGG AGCTCCCTTA TCGAGGACAA CGAATCGGAT 
AACCGGTTGG CGGATTGCTC TCTGATGAAC GATCCAACGG AGCCCTTGCG GTATCCATGG 
ACGAACCTCC CGACACAAAG ATTCAGCGAC CGCAGCACTC GCAACAAAGA GAGTCTTGTC 
CCGCCACTGC CCGATCCTCT CGATCGATGC GCCGCCGAAT TCTACAGCTT GTTGCTGCGG 
CACCTCGAAA CCAAACGTGT GGCCGATCAA GCCGCCACTC AGGACTTGCT TGCCTTTTTA 
CGGAAATATC CCTTGGTTGG CCAAGTACAC TTCCGCTTAC CCGACTTTGC CAGTGCATAT 
TGCTTGCCAC TGGCTTACTT TGCGGCGATA TCCTCGTTGG AGGGCTGTCA GCTCGCGTAC 
CGTCTCTATC CCGAAGCGAT CGGGATGGAA GATGACTTTG GTCTCCCTTT GCATTATGCC 
TGTTACTTGC AAGCCGATGT ACAGGTAGTA TCGTTTCTAC TGGCCCGCTA TGGGGAAGCG 
GCTAAACGAA CCAATCAGGA ACATCAAACG CCGCTACACT TGGCTTGTCA GGTTGCCACT 
CCTGGACCGA CGACGAGCTC ATCCTCGAGT ACTAGTTTGG ATCGACTGGT CCGGGAACCC 
AATCTGCAGG TTCTGAAAGT TCTCCTCGAG CACTACCCTA CCGCTTCTCA ATTGGCCGAT 
CGGGAGGGGA ATTTACCGTT GCACTGGGCC TTGCAAACCT CGGGCATTTC GTTGTCACGT 
TGCCAGGCCT TGGCCGCTCC GAAACCGCAC CATCAAACGC TTCGCCGGAG CAACCGGATA 
CTGGAGAAAC CTTTGCATGT GGCTTGCCGG TTTGGTGTGT CGATGGAAGT CTTGTCTTGG 
CTGCTCGAGG AGCATTTGGG CGCGGCCAAG ACTACCAACG AAAGGTTTGA AACACCACTG 
CACGCGGCTG TATTGGGGGA ATCCGAGTCG AGTCGGAACA TGCGGTGGAT GCAAGCGCTG 
GTCCGAGCCT TTCCTGACGC CCGATCTTGG ACCGACGAGC GGGATGAACG GCCCGTGGAC 
AGTGCCATAC GAATGGGCGC ACCGGAAGGT ATTGTGTCTT TGCTAAGCGT GGAATAA 

 

Protein sequence

MFFYSWFGST AARAHRHFPA LPEPLDDAVA IHDEHQSSSG SCKDDPPDIP VRKNDETCVR 
TAVHSITIPK WDAPLQSAAH EPSLHNLDNP DQSAHQTDNS VTSWCRQHVP SGASWNGRAS 
CRHQQYITNR QQLLTEDEET DSLFPLHTIP FVSIELRLEP TDHSDDDDDD DDLFGCPPHG 
PRTRQAYTSW DAPDIAADVV SATPSDPPQR TGQIRIGGTK SIEFPDALPS RLDETVHLYN 
ASQGCHADSP PAQFVSTIPA HFAVPVEITV VPNHDPGNCR KDQASYNVCW SSLIEDNESD 
NRLADCSLMN DPTEPLRYPW TNLPTQRFSD RSTRNKESLV PPLPDPLDRC AAEFYSLLLR 
HLETKRVADQ AATQDLLAFL RKYPLVGQVH FRLPDFASAY CLPLAYFAAI SSLEGCQLAY 
RLYPEAIGME DDFGLPLHYA CYLQADVQVV SFLLARYGEA AKRTNQEHQT PLHLACQVAT 
PGPTTSSSSS TSLDRLVREP NLQVLKVLLE HYPTASQLAD REGNLPLHWA LQTSGISLSR 
CQALAAPKPH HQTLRRSNRI LEKPLHVACR FGVSMEVLSW LLEEHLGAAK TTNERFETPL 
HAAVLGESES SRNMRWMQAL VRAFPDARSW TDERDERPVD SAIRMGAPEG IVSLLSVE