Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_38075 |
Symbol | |
ID | 7203258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | + |
Start bp | 340 |
End bp | 888 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182140 |
Protein GI | 219123663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCG ACAAAGAATT TGTCAACGCC CTAGAGGATC ATATCCGCTA CCGTGGGGCC ATGGATAAGC TCATCAGCGA CCGTGCCCAA GCTGAGATCA GTAAAAAGGT TACTGACATT ACACGGGCTT ACCACATTGA CCAGTGGCAA AGCGAACCAC ATCATCAACA CCAGAACTTC GCTGAACGAC GCATCGCTAC CATTGAGGCC AATACGAACA ACGTTCTCAA TAAAACGGGC GCGCCCAATT CTACCTGGTT ACTCTGTGTT ACTTACATAT GCTATGTATT TAACCATCTT GCGCACGAAT CTCTAGATAA TAGAACTCCG TTGGAAATTC TCAACGGATC GACCCCTGAT ATCAGTGTTC TCCTCCAGTT CTCTTTCTGG GAACCTGTTT ATTATAGGAT CGAAGATGCC ACCTTCCCGT CCGATGGTAC CGAAAAACGT GGTCGTTTCG TCGGCATCGC AGATTCTGTA GGTGACGCTC TCACCTATAA GATCCTTACC GAAGACACCA ACCGCATCCT ATTCCGTTCT AGTGTGTGA
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Protein sequence | MKTDKEFVNA LEDHIRYRGA MDKLISDRAQ AEISKKVTDI TRAYHIDQWQ SEPHHQHQNF AERRIATIEA NTNNVLNKTG APNSTWLLCV TYICYVFNHL AHESLDNRTP LEILNGSTPD ISVLLQFSFW EPVYYRIEDA TFPSDGTEKR GRFVGIADSV GDALTYKILT EDTNRILFRS SV
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