Gene PHATRDRAFT_29217 details

Gene Information

• Locus tag: PHATRDRAFT_29217
• ID: 7203235
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: +
• Start bp: 662451
• End bp: 664684
• Gene Length: 2234 bp
• Protein Length: 406 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002182273
• Protein GI: 219123940

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGAGGTTC CCATTGCGTG TGTTTCGAGA CCATTCATTT GCCAATCTTT CCACCTTGTC 
ACAGTCCTAC CTCCATTCCT TTTGGAAGTA GTCGCCCGAA AAGATTGAGA CAGAACGCGT 
CGGACAAAGC AGTCAAACAT GGTGGACGAG AAAGAACTGA GCGATGCCGA ATCCGTAGGC 
AGTGAAGCCG AAGAAGAGGC GGAAGAAGTT ACGGATCTTT CCAGTAGGTA TGTGCGACGA 
ATGGTGAAGC GACAGGGTGC AAGGCAACGT CGAAGTGCAG ATTACAGGGT CGGAAAGTCT 
TGTATGCGGA AGAGCTTTAC TCACGCTTGG ATTTTTCTTT GGCTTTCTCC GATTGCAAAC 
TCACCGTTTA CAGCGACGTT TGTACCAAAT ACCAAGAAGC CGCCAAGATT GTCAATCTCG 
CCTTACAAGG CCTGGTCTCG CAGTGCGTTC CTGGTGGGAC CATACTCGAT ATTTGCGAGT 
TTGGGCAAAC AATCATTACC ACGCAGTCAG CTAAACTCTA TACCAAAAAG GTCAACGGAC 
AAGTCGTGGA TCGGGGAGTG GCGTTCCCCG TTTGCATTTC CGTCAACGAC ATTGTCTGCA 
ATCATTCGCC CTTGCCAAAC GAAGAACGGG TAAGTGCCGT CCCATGTGGT ATAGAGAAAA 
ATGGCGTACC TGCCGTACAA AATAACCTGT GGTGGTCGAC ACAAGTATGC CACGATTGCT 
TGCCGACCGT ATCGCTCAAA ACGATACCGT TCATTTCCTC CCCACTTTCT ACGGAAAGGA 
GGAGGAAGGG CGGGCTTTGA CTGGACTGCA GACCCGTAGT AGAGAACTGC ACAGGAAGAC 
GAATGGACGA GGATTGTGTG CTTTGGTCGT ATCACTCGTG TACTGCTGCG CGTCTGCTTG 
TCACCGCGCG CACCGAGTCG GTCCCGAAAC GCCTCTCTCT CGAGCCGAAT GTGACCGATC 
GCTGCCGCGT AGACCCTCTG TTCCCATGGT CACAGGACGG TGGCGTGATG GGTCGATGCA 
TTCCACAAAT CCGCTCTCCC CCATTAACGA TTACGTGCCC GAGTACCCCC ATCCATCCCA 
CACACACACT TTGTGTCTCA CACGCTGATT TCTTCTTTTG CTGTTTCCTC TATTGTACAT 
ACACACCCAC GGAAACCGGC CGCAGCCTGC ACTCAAAGCC GGAGACATTG TCAAGATGGA 
TCTTGGGTGC CACATTGACG GTTACATTGC GGTAGCCGCA CACACGTGTG TTGTCCCGGA 
ATCCCCCGAT ACCCCACCCA CGCTGGAAGA CGCCCAAGTC ACGGGCAACG TGGCTGTAGC 
CGCGTACAAC GCCATGCTAG TGGCCGCCGC TACCATTGCG GCCGGAAAGA AGAATACGGA 
CGTCACCAAG GCCGTCGAAC GGGTCGCTCA AGCCTACGGT GTCACCCCTA TTAGCTCGGT 
CCGTATGCAC CAAATGAAAC GTTACGTCCT CGACGGTGTT AAGGAAGTCG CGCTCAAGGA 
ACCCACGGCG GAAGAAATTG CCACTGAAGA ACGCTTGCCC GAATGTACCT TTGAACAGAA 
CGAAGTCTAC GCTGTCGACG TGGCCATGAG CACCGGCGAC GGCAACGCTC GTCCGGGAGA 
TTTGCGCACT ACCGTTTTCA AACGCAACGT AGAGCATCAG TATTCCCTCA AAGTGCAGGC 
CTCGCGTCAG CTTTTGGCCG AAGTGGACAG CAAATTTCCC ACCATGCCCT TTACACTCCG 
ACACTTGTCC GACGTTCGTA AGGCGCGATT GGGGATCCCT GAGTGCGTCT CGCACGGGTT 
GTTGACACCC TACCCGTCCC TGCACGATCA TTCTGGAACC GTGGCGCATT TCAAATGCAC 
CGTCCTATTG TTGCCTTCGG GAACGATCCG GGTGACAGGT CTTGAAAAAC CGGAATACTT 
CCAAACGTCC ACGGCACCGG ATGAGGAGAC CGTCAAGGTT TTGCAACAAC TCGAGGAAGA 
AGCGGCTAAA AAAGCGGCCC GGAAGGCGGC CAAGAAAAAC AAGAAAAAGA GCAAGAAATA 
AAGCGCGCGA GTCTGACAAA GTCCCCTTTG ATATGGCTCG GAAGGTAAGG CGACACGCGA 
CGGAATGTAG AGGCGAGTGG AAGGCATCCA AAGCTAACTT TCGTCAACGG CTTATCTGGC 
GACGGAAAGA AAGTAAATAA AGAAGCTGCA TCCAACGAAT TATGTTTTAT TAGCGAAATA 
CGCTTGCGTT GTCG 

 

Protein sequence

MVDEKELSDA ESVGSEAEEE AEEVTDLSSS DVCTKYQEAA KIVNLALQGL VSQCVPGGTI 
LDICEFGQTI ITTQSAKLYT KKVNGQVVDR GVAFPVCISV NDIVCNHSPL PNEERPALKA 
GDIVKMDLGC HIDGYIAVAA HTCVVPESPD TPPTLEDAQV TGNVAVAAYN AMLVAAATIA 
AGKKNTDVTK AVERVAQAYG VTPISSVRMH QMKRYVLDGV KEVALKEPTA EEIATEERLP 
ECTFEQNEVY AVDVAMSTGD GNARPGDLRT TVFKRNVEHQ YSLKVQASRQ LLAEVDSKFP 
TMPFTLRHLS DVRKARLGIP ECVSHGLLTP YPSLHDHSGT VAHFKCTVLL LPSGTIRVTG 
LEKPEYFQTS TAPDEETVKV LQQLEEEAAK KAARKAAKKN KKKSKK