Gene PHATRDRAFT_29174 details

Gene Information

• Locus tag: PHATRDRAFT_29174
• ID: 7203204
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011683
• Strand: -
• Start bp: 559975
• End bp: 562281
• Gene Length: 2307 bp
• Protein Length: 544 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002182420
• Protein GI: 219124247

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGAGCCGCAA CTCGAAGGCT TTTTGGTTCC CTCCATCTTT CCCCCCTTTC GTTTTGGTCT 
CTCTCTCTCT CCACTACCAT TGACTCCTCC GCATCTTGTT AATCGCGTCA TCTAACAAAT 
ACCAAAAGTC ACGATGAGTT CGGCGCAAAA ATCCGCGAAT GTAAGTGAGA CAACACGAGT 
CCTGACGAGG CCGGAGCAAG ATGGCGCACG AGACACGAAC GCGGTCTGTG TTCTTTTGTA 
GAACTAGTAC CAGTTTCTAC GTACCATCGA TTCGGAACGT GGCCTGTTTG GTTGGGACAG 
AAGCTTCCGT GGAAGGACGT CCAACACTCT CGTATCTCTC TCGTTCGCTC ATTCTACTTT 
CTCTCCCGTA CACTATTTGA TATTGCAGCA CCGTGGACAC TTCAAAAAGA CGGTCGACGT 
GGAGGACTCG CGTCGTTCGC GCGAAGAGAC GACGCTGCAC ATCCGCAAGG CGAAGAAGGA 
TGCCCGCATG GCCAAGCGTC GTCAAATGCC CACGGGGGAT CACGCCGGAC CCACCCCCGC 
TGGATTAGCG GCAGCCGGTA TGCTCATGAA CTCGGGCGAC AACACGTACG CGGGGATGAT 
GGAAGACCAA GCCAATGATG GATCCGATGG AAACGTCGCT CGTTCGCTGG CGGCGTCCAA 
GTTGGAGCAG TTGCCCGCCA TGGTGCAGGG TGTGATGGGC AACGACCCAG CGGTGCAAAC 
GGAATGTACC ACACAGTTTC GTCGGTTGTT GTCCATTGAA AAGAATCCGC CGATTCAGCA 
AGTTATTGAC ACCCACGTCG TCCCGCGCTT TGTCGAGTTC TTGAGCCGGG ACGATAACCC 
AGCCTTGCAG TTTGAAGCCG CTTGGGCACT CACCAATATC GCCAGCGGAA CCTCGGATCA 
TACGAAAGTG GTCATGGAAG TGGGTGCCGT GCCCATTTTT GTGCGGTTGC TGCTCAGCCC 
CAACGACGAC GTTCGTGAAC AAGCCGTCTG GGCCCTGGGA AACATTGCCG GGGACTCCCC 
TCCCTGTCGC GACCTAGTTC TGCAAGCGGG AGCCATGAAT CCCCTGCTCC AGCAATTGCA 
CCAAAATTCC AAGCTCACCA TGTTGCGCAA CGCTACCTGG ACGCTTTCCA ACTTTTGCCG 
CGGCAAGCCC CAACCGGATT TTGAAATGGT CCGCCCGGCA TTGCCCACCC TGGCACAGCT 
CATTTTCAGT CCCGATGAAG AAGTACTGAC GGACGCCTGT TGGGCTCTAT CCTACCTTTC 
CGACGGACCC AACGAAAAGA TCCAAGCCGT CATTGAAGCG GGTGTCTGCC GCCGTCTCGT 
GGAACTGCTC CTCAATCCTT CACCGGCCGT ACAGACCCCG GCACTCCGAA CCATTGGTAA 
CATTGTTACT GGAAACGATC TGCAAACGCA GTTCGTCATC AACAACAACG CGTTGCCCTG 
TCTCTTGGCG CTTTTGGCGT CACCCAAGAA AGGAATTCGC AAAGAAGCTT GCTGGACCAT 
TTCCAACATC ACCGCCGGTA ACAAGGAACA AATTCAAGCC GTAGTGGAGA ACAATATCAT 
CCCGCCGCTT ATTCAGCTCT TGACCAACGC CGAATTCGAC ATCCGCAAAG AAGCAGCCTG 
GGCTATTTCC AACGCCACGT CGGGAGGGAG TCAGCAGCAG ATCAAATTCC TGGTACAACA 
GGGATGCATT CGACCGCTTT GTGATTTACT CAGCGTAGCG GATCCCAAGA TTGTCACTAT 
CGCCTTGGAA GGGTTGGAAA ATATTCTCAA GATTGGTGAC GAAGAAGCGC GCCTCACCAA 
CGGACAAAAC CAGATGGCCG TGTACGTTTC CGAAGCGGAA GGTCTCAACA AGATTGAAGA 
CCTACAGCAG CACTCCAATA ACGCTATTTA CGAACAAGCC ATTCGTATGC TCGAAACCTA 
CTTTGGAGTT GAGGAAGAGG AAGAAATGGC GGCTATTGCG CCCGCCATGG AAGGTGACCA 
GTTCGGCTTT GGTATGGATC AACAGCCCGG AACGGGAACG TTTGACTTTT CCGGTGGGCA 
ATAAGGACAC GCGCGATAAG GCTACGAGCA CGGCCTCGAG CGGTAACAAG ACGACTCGCA 
CACACACGTG AGCCGCTTGC CATCCCGAGC CCGTCTTCTT TATTTCCAGC CGCACGTACA 
GTACGGCCTT TGGGAGGCAA AAACGCACGA CTTGTCGTTC GTCTGTTTTT TGTCACCCAG 
AGCCCGTGCA GGATTCTAAA TACCAAACGA TTGATAGAGA GGCGCGACTT AAGGAGCGTT 
TCCAATAGAA CCATGTTACA GTCCAGG 

 

Protein sequence

MSSAQKSANH RGHFKKTVDV EDSRRSREET TLHIRKAKKD ARMAKRPAAG MLMNSGDNTY 
AGMMEDQAND GSDGNVARSL AASKLEQLPA MVQGVMGNDP AVQTECTTQF RRLLSIEKNP 
PIQQVIDTHV VPRFVEFLSR DDNPALQFEA AWALTNIASG TSDHTKVVME VGAVPIFVRL 
LLSPNDDVRE QAVWALGNIA GDSPPCRDLV LQAGAMNPLL QQLHQNSKLT MLRNATWTLS 
NFCRGKPQPD FEMVRPALPT LAQLIFSPDE EVLTDACWAL SYLSDGPNEK IQAVIEAGVC 
RRLVELLLNP SPAVQTPALR TIGNIVTGND LQTQFVINNN ALPCLLALLA SPKKGIRKEA 
CWTISNITAG NKEQIQAVVE NNIIPPLIQL LTNAEFDIRK EAAWAISNAT SGGSQQQIKF 
LVQQGCIRPL CDLLSVADPK IVTIALEGLE NILKIGDEEA RLTNGQNQMA VYVSEAEGLN 
KIEDLQQHSN NAIYEQAIRM LETYFGVEEE EEMAAIAPAM EGDQFGFGMD QQPGTGTFDF 
SGGQ