| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_22122 |
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| Symbol | GapC1 |
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| ID | 7203017 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011683 |
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| Strand | + |
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| Start bp | 748753 |
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| End bp | 750258 |
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| Gene Length | 1506 bp |
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| Protein Length | 379 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | glyceraldehyde-3-phosphate dehydrogenase precursor |
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| Protein accession | XP_002182291 |
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| Protein GI | 219123978 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.196942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | AGTTCGTCGA TAACTTTGTA CCTGACAGTT AGTTCACTCT ACTTTCTTTT TTGACTCCAT
CATGAAGTTC TCTGCCGCCA CTTTTGCTGC CCTTGTAGGA TCTGCCGCTG CCTACTCCAG
TTCTTCGTAA GTGGATATCT TGCCTGCTGC TGCTGTTGTG GCACGTATCG AGACACGTCG
CGACGACGAA GAGCCGAAGG AAGGGTTCGG ATCCAAGCCT ACCGCGGTTG GTTGGAAGGA
ATACGCGTCA ACTGTAAAAG CATCTCCGCA CCGTAGTTCC CTTTGGTCTC TAGCCTGTAT
TACGCAAACG CAGGCGCTTA TTCATTTGCT CATTCAAGTA CTCACACGTA TCCACTCACT
CTCGTTGCTT TGACAGCTTT ACCGGATCGG CCCTCAAGAG CTCGGCGTCC AACGATGCCT
CCATGTCGAT GGCTACCGGT ATGGGAGTCA ACGGATTCGG ACGTATCGGA CGTCTCGTCA
CCCGCATCAT GATGGAAGAC GACGAATGCG ATTTGGTCGG AATCAACGCC GGTTCCGCCA
CTCCGGACTA CATGGCCTAC CAGTACAAGT ACGATACCAT CCACGGCAAG GCCAAGCAGA
CGGTCGAAAT CGATGGCGAC TTCCTCGTCT TGGACGGCAA GAAGATCATC ACTTCGCGCT
GCCGTGACCC CAAGGAAGTG GGCTGGGGCG CACTCGGAGC CGACTACGTC TGCGAATCCA
CCGGAGTCTT CCTCACCAAG GAATCCGCAC AGTCCATCAT TGACGGAGGC GCCAAGAAGG
TCATCTACTC GGCACCCGCC AAAGACGACT CACTCACCAT TGTCATGGGA GTCAACCAGG
AAGCCTACGA TGGTTCGGAA GATTTCATCT CCTGCGCTTC TTGCACCACC AACGGACTTG
CCCCTATGGT TAAGGCCATT CACGACGAAT TCGTCATTGA GGAAGCCCTC ATGACCACCG
TCCACGCCAT GACCGCCACC CAGGCCGTTG TCGACTCCTC ATCCCGCAAG GACTGGCGCG
GAGGACGTGC GGCCTCGGGA AATATCATCC CATCCTCCAC CGGAGCCGCC AAAGCCGTCA
CCAAGGTCAT TCCTTCCCTC GTTGGAAAGA TCACCGGCAT GGCCTTCCGT GTCCCCACCA
TTGACGTCTC CGTCGTCGAC TTGACCGCAA AACTCGAAAA GTCCACCACT TACGAAGAAA
TCTGTGCCGT CATCAAGGCC AAGTCCGAGG GTGAAATGAA GGGATTCCTC GGATACTCCG
ACGAACCGTT GGTCTCCACC GACTTTGAAG GTGACTTGCG CTCCTCCATC TTTGATGCCG
ATGCCGGTAT CATGCTCAAC CCCAACTTTG TCAAGCTCAT CGCCTGGTAC GACAACGAAT
ACGGTTACTC CGGCCGTGTC GTCGACCTCA TGAAGCACGT CGCGGCCGTC GACGCCAAGA
TCAAGGCCTA AACGCACAGC CGACTTGGGA ATAAACACTT ACTAGCGAAC AAATTGTTGC
GAAACA
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| Protein sequence | MKFSAATFAA LVGSAAAYSS SSFTGSALKS SASNDASMSM ATGMGVNGFG RIGRLVTRIM
MEDDECDLVG INAGSATPDY MAYQYKYDTI HGKAKQTVEI DGDFLVLDGK KIITSRCRDP
KEVGWGALGA DYVCESTGVF LTKESAQSII DGGAKKVIYS APAKDDSLTI VMGVNQEAYD
GSEDFISCAS CTTNGLAPMV KAIHDEFVIE EALMTTVHAM TATQAVVDSS SRKDWRGGRA
ASGNIIPSST GAAKAVTKVI PSLVGKITGM AFRVPTIDVS VVDLTAKLEK STTYEEICAV
IKAKSEGEMK GFLGYSDEPL VSTDFEGDLR SSIFDADAGI MLNPNFVKLI AWYDNEYGYS
GRVVDLMKHV AAVDAKIKA
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