| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_22117 |
|---|
| Symbol | |
|---|
| ID | 7203014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011683 |
|---|
| Strand | - |
|---|
| Start bp | 739291 |
|---|
| End bp | 740609 |
|---|
| Gene Length | 1319 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182448 |
|---|
| Protein GI | 219124306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.701766 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGGTGCCATT GGCAAGCCGA ATAGGTTTTT TTTTCATGAG TGATCATGGT TGTCCTGGAA
AAGCTGTTTC TGTATCGGAG TATCTGCGTC GGATCCCGAA AGTCGAACTA CACGCGCATT
TGAACGGATG CATTCGGCAC GAAACCTTGA TGGATCTAGC TCACGAGAGA GGCGCGACGC
TGAGTAACAG GCACTTTTCT GCGGAACCGC TCCACGAGAA CCTCGCTTCA CCCCCAAACA
ATGGCGAGCA CCACAGCATG TACAATATCA TGCCACGATC TCTGCAGAAC TGCTTCGATA
TATTTGCCGA AATTCCGGCT TGCGTTAACG ACTTGTCGGC ACTGCGAAGA ATAACGCAGG
AAGCTCTGGA AGATTTCGCA GCACATCACG TTGCCTATCT CGAATTGCGT TCTACACCGA
AGCGCTTACT GCGGTCACAT CAAGATGATC AATCGCAAAA GGTTGACAAA CAGGTGTACA
TTGAAACAGT GTTGGAGGGT ATACGCGACT TCCAGAGCAA AGAAAAGGAA CGCTTCAGTC
ACGATCCAGT ATTGTCATCG TCTCGGTTAC CTATCGTGTG TAACTTCATT GTCGCTATCG
ACCGATCGCA GTCCCTGGAA GAAGCAACGG ATACTGTACA TATTGCAATC GACATGTTCC
AACGCCAGCA GAGTCGGCCT TCCAATCTCT CGCCGTCAAT TGTCGGAATC GACTTGGGGG
GCAATCCGAC CAAAAATGAT TTTCGGACTT TTCAGACCCT CTTTCAAAAG GCGAGACAGG
CCGGACTCAA GGTGACGATC CATTGTGGTG AAATCCCATG TGCAGAAGAT GATAACAGCA
AACACGAGCG TCGCGTTGCC ACCGAATCGA AACGGAAAGC CCGGGACGAA GCCGTGGCCA
TTTTGGCTTT CCGACCGGAC CGTTTGGGAC ACGCCTTGTT GCTCCCATCC TCGCTTCAAA
AAGTGCTGGA AGACACCAAG ATCCCCGTGG AAACCTGCCC CACAAGCAAT GTCATGACGT
TGGAACTCGC CAGATCCTCG AACGGGAATC TCGTGCACGG ACTATCCCAG CATCCCTGTT
TGGCACAATG GCTCCAGAAC AATCATCCAT TGTCTATTGG TACAGATGAC CCGGGTGTCT
TCCATACCAA CGCAACTAAA GAACTGGTGT TACTGGTCAA TACCTTTTCT TTGGATCCTT
GTGCAATGGC AGAAAAGGTT GCTGATTCTG TCAACTACGC GTTTTGCAAT GAGACTCTCA
GGCAAGAGAT AAACGCCAAG ATGCGTGAAA TCATGAAAGA GATTCATCAT TCTTCCTGA
|
|---|
| Protein sequence | MSDHGCPGKA VSVSEYLRRI PKVELHAHLN GCIRHETLMD LAHERGATLS NRHFSAEPLH
ENLASPPNNG EHHSMYNIMP RSLQNCFDIF AEIPACVNDL SALRRITQEA LEDFAAHHVA
YLELRSTPKR LLRSHQDDQS QKVDKQVYIE TVLEGIRDFQ SKEKERFSHD PVLSSSRLPI
VCNFIVAIDR SQSLEEATDT VHIAIDMFQR QQSRPSNLSP SIVGIDLGGN PTKNDFRTFQ
TLFQKARQAG LKVTIHCGEI PSRDEAVAIL AFRPDRLGHA LLLPSSLQKV LEDTKIPVET
CPTSNVMTLE LARSSNGNLV HGLSQHPCLA QWLQNNHPLS IGTDDPGVFH TNATKELVLL
VNTFSLDPCA MAEKVADSVN YAFCNETLRQ EINAKMREIM KEIHHSS
|
|---|
| |