Gene PHATRDRAFT_14607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14607 
Symbol 
ID7203237 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp689366 
End bp690608 
Gene Length1243 bp 
Protein Length337 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182442 
Protein GI219124294 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.501177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCG AGATACGACC GATCGATCCC GAGTCGGTCC AGAGGATTGT TGCGGGACAA 
GCGGTCTTTG ATCTGTCCAC GGCCCTCAAG GAATTGGTGG ACAACGCTCT GGATGCCAAG
AGTCGCACCA TCAACAGTAA GTGTCGGACG GTGGTTCCAC ACACGCGCAC ACGGTCAGGA
GAAAGTCGAC GGTACGTTTG TCCGTCGCTC ACCGCCTTTT TGTTCGTCTT TTTTCTGTTT
GTAACTTTCC GACACTGCGG CCCCTGCTCC AGTCCGTCTG TTCAATCTGG GCATTGACAT
ATTGGAAGTA TCGGACGATG GCATGGGTGT TCCACTCGCC TCCCGTCCAT ACTTGGCCAC
GCCGCACGCA ACGAGTAAAA TACGAGCCTT TGACGAAATC TACGCCACGG CATCGACTCT
GGGCTTTCGT GGCGAAGCGC TCTTTTGCCT CGCCAACCTC AGCACCAACC TCATCGTGGC
CACCCGCACC CGCGACGAAG CCACGGCGCA GAAACTCGAA TTCCGTCGGG ACGGATCGCT
ACGGACAGAC ACCGTGACGA GTATACTCAA AAAGGTCGGG ACGACCGTTG CAGTCGTTGG
TTTGATGGAC GCCTTGCCGG TTCGTCGACA CGATTTGATT AAAGGCATTC AGACACAACG
ACGGACCATG CTACGCATGC TGGAAGGCTA CGCCATCTTC TCTCCCGGAG TCGGCTTTCG
TTTGATGGAC ATGATGGATG CGGGACGGGG AGGAGAATCG CTCTTACTAG CGACCCCGCA
GAATAGCTCG TCCATCGAAG AAACCGTGTC GGCGACACTG GGACCCAAAG TCTTGCCCTT
TCTGTGTCCC ATTCAGGTCG ACTTGTCGAC CGTCCTAGAG GCACCGGTAC CGAACTTGTC
CCCCGCAACC ACGTCATCCA ATCCTCCACT CCGTACACCG ACACTCTCTG GCAAAATGGA
AGGTCTCATT TCCAAAGCCA AGACACAATC ACCACGGAAC TCTCAATACT TTGCCATCAA
CGGACGCCCC GTCGAGTTGA AACAAGTGTC CAGGGTCTTG AACGAGGCTT GGAGGGCGTT
GGGGTGCAAA AAACGTCCCT TTTGTGCACT GCAATTCACA CTCCCCAACA ACGAATACGA
CATTAACCTG TCGCCCGACA AACGGACCGT CATGCTGACG CACGAACCAC AAATATGCGC
TCTGGTTCGA GACGCCGTGG TCGAACTCTG GGCCAGTCAA ACC
 
Protein sequence
MSAEIRPIDP ESVQRIVAGQ AVFDLSTALK ELVDNALDAK SRTINIRLFN LGIDILEVSD 
DGMGVPLASR PYLATPHATS KIRAFDEIYA TASTLGFRGE ALFCLANLST NLIVATRTRD
EATAQKLEFR RDGSLRTDTV TSILKKVGTT VAVVGLMDAL PVRRHDLIKG IQTQRRTMLR
MLEGYAIFSP GVGFRLMDMM DAGRGGESLL LATPQNSSSI EETVSATLGP KVLPFLCPIQ
VDLSTVLEAP TQSPRNSQYF AINGRPVELK QVSRVLNEAW RALGCKKRPF CALQFTLPNN
EYDINLSPDK RTVMLTHEPQ ICALVRDAVV ELWASQT