Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14536 |
Symbol | AP3sigma |
ID | 7203104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011683 |
Strand | + |
Start bp | 367843 |
End bp | 368292 |
Gene Length | 450 bp |
Protein Length | 150 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182207 |
Protein GI | 219123803 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG GGATCATTAT CGTCAATAAC CACGGAAAAC CGCGACTCGT CAAGTTTTAC CAAAACGTGG AATCGGAAGC GCTGCAGCAA TCTGTTATTC GTCGTGTCTT TCAGCAGGTT GCCGCACGGC CGGACTCCTT TTGCAATTAC TTGGAAGGGA TTGTACCAGA ATGGGGGGAC CATATAAAGC TCATCTATCG ACACTACGCT ACTTTATATT TCGTTTTTGC GGTTGACCAG CAAGAGAGCG ATTTGGGGAT TTTGGATCTT ATTCAAGTGT TTGTAGAAGC GCTCGATAAG TGTTTCGAAA ACGTATGCGA ACTGGATTTA ATATTCCATT CCGATCGGGT ACACTATATA TTGGACGAAA TCGTTATGGG TGGCATGGTC TTGGAGACCA ACATCCAGGG CGTCCTACAA TCCATCAAGG ATCAGGGCAA AATCCATCAA
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Protein sequence | MIKGIIIVNN HGKPRLVKFY QNVESEALQQ SVIRRVFQQV AARPDSFCNY LEGIVPEWGD HIKLIYRHYA TLYFVFAVDQ QESDLGILDL IQVFVEALDK CFENVCELDL IFHSDRVHYI LDEIVMGGMV LETNIQGVLQ SIKDQGKIHQ
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