Gene PHATRDRAFT_14453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14453 
SymbolhCDK7 
ID7203079 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp246995 
End bp248286 
Gene Length1292 bp 
Protein Length358 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182186 
Protein GI219123759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.750891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTCGGAGATC GGTACGATCT CTTACGGATG CTGGGCCGGG GCTCTTATGG AGAAGTTGCG 
CAGGCCATTG ATTTGTATGC GGGACGTGCG GATGCCTTTG TGGCGATAAA ACGAATCCTC
TCCCCGTTTG ATCAAGAAGT AGACGCTGTA CGCCTGTACC GGGAGATTCA CATTCTCCGG
CGGATGCGGG GGCACGACTG CATTATTCAG TTGTTGGATG TCGTCCAGCC TCCCACTGAC
GATCTAGACG ACTTTCATGA TCTGTATTTG GTGTTCGAGT GTAAGTTATG CTTGTTGTTG
AAAACTGTCG TCATCTATGC ATGTGCCTTC TGACGGGGAC CTTTCTCGCT GATTTTTGCA
GATGTTGACA CTGATCTTTA CAAGCTCATC ATGTCACCAC AATATCTGAC AACAGAGCAC
ATTCAGACAT TTTTGTATCA GATGCTCACC GGGTTGAAGT TTATTCACTC CTTTTCTGTG
ATTCATAGGT AGGTGAATAT TTAAATGATA CGTGATGAAA ATGCCATGTT CCTGACTCTT
GTCTGTCGTC TTAGAGATCT GAAACCCGCC AATATTTTGC TCAACGAAGA CTGTTCGTTA
AAGGTGAGTG TGGGCGCAGT GTCGTGTTCT AGTCGAAGTA CATAGTGACC CACAAATTTG
ATTGCTTCCT TTAGATTTGC GATTTTGGGC TGGCTAGAAT AGTCGACTCG TCGTCCATGT
CAACTTCGAA ACAAGACGAC GATGTACAGC GACTTAGATC TCCCGGAAGC TTTGGGCTCC
CTCCAAAAGT TGGTTTGACC CGACAACTGA CAAAGCACGT TGTGACCCGT TGGTACCGTG
CTCCCGAACT CATTCTTATC CAGCCATATA CTTCGGCAGT CGATATTTGG AGTCTTGGTT
GTATCCTAGC AGAGCTCCTG AGTATGCAGG AAGGTAACGT TTCCGGATAC GAGGACCGAA
AGCCACTTTT TCCAGGTGGG AAATGCTTTC CTCTCTCTGG AGAAGGCGAA ACCATGAAGG
CGGATGAACG TTTAGACCAG CTGAGTGTTA TTTTTGGGGT CATCGGAAGT CCGCCCCCGG
AAGATATATC AGCGATAGGA AAGGCGACCG CCTACATTGA TTCTCTCGGC AAAATAGAGG
GCAAACCACT AGAGAAAGTT TTCCCGGCTG CTGATCCTCT AGCCTTGGAT CTGCTGCAAA
AAATGCTTTA TTTCAATCCA AAGAAACGAT GCACAGCCGA AGAGGCGTTA GAACATGCTC
TTTTTAAAAA CGTGCGGCGA AAAGAGCTGG AA
 
Protein sequence
VGDRYDLLRM LGRGSYGEVA QAIDLYAGRA DAFVAIKRIL SPFDQEVDAV RLYREIHILR 
RMRGHDCIIQ LLDVVQPPTD DLDDFHDLYL VFEYVDTDLY KLIMSPQYLT TEHIQTFLYQ
MLTGLKFIHS FSVIHRDLKP ANILLNEDCS LKICDFGLAR IVDSSSMSTS KQDDDVQRLR
SPGSFGLPPK VGLTRQLTKH VVTRWYRAPE LILIQPYTSA VDIWSLGCIL AELLSMQEGN
VSGYEDRKPL FPGGKCFPLS GEGETMKADE RLDQLSVIFG VIGSPPPEDI SAIGKATAYI
DSLGKIEGKP LEKVFPAADP LALDLLQKML YFNPKKRCTA EEALEHALFK NVRRKELE