Gene PHATRDRAFT_14403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14403 
Symbol 
ID7202943 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011683 
Strand
Start bp16692 
End bp17879 
Gene Length1188 bp 
Protein Length359 aa 
Translation table 
GC content49% 
IMG OID 
Productphospholipase 
Protein accessionXP_002182144 
Protein GI219123671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.990038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCCT TTTCACCGAG CATATTTTTT GTCGTACTCC TGCCGCCAAT CATCTTCAAC 
AGCGGCTACC ACTTGCGACG CGATTTGTTC TTCCGGAACA TTGTACCCAT ATGTATGTAC
GCTTGCATAG GAACGGCTGT TTGTACGATG GTGGTAGCTT CTATCCTCTA CGTCTGTGTT
CCACTCTTTG GCTTTGGCTT TCGACCAACC TTTCTGGAAC TGGCAGCCTT TGGTGCGCTC
ATTAGCGCCA CCGATCCAGT GAGTACCTTG GCGGTGTTTC AGTCCAAAAA GGTGGACCCG
CATCTCTTCT ATCTCGTCTT TGGTGAAAGC GTCATCAACG ATGCCGTCGG TCTCGTATTG
TTCGAATGCT TGGCCCATCT CATCGAAAAG CAGCAAAACC AATTGAACGT GGGACAAGAG
TTCGCTCAGT TCCTTTACGA CTTTAGCACG GGCTTCTTGG GGTCCTTGGT ATTGGGAACG
CTATTCGCCA TCACCTATGC GCTCTTGATG AAGCACGTCG ATATGAGAAA GACACCCTTT
TTGGAATTGT GTGTTTACAT TACTATGATG TACTTTCCTT TTGTTGCGGC CGAAATATTG
CGCCTCAGTG GTATCGTTAC GGTCTTGTTC ACTGGGATTG CATCCAAGCG ATACGTCGAG
CCCAATGTTT GCGCCGAAAC TGCCGTCAAT GCCGATATTG TTTTTCGACT GGTAGCCCAT
TTGACCGAGA CCATCATCTT TTTGGATTTG GGGTTATCGG TATTTGGTTT GGTGGGCGAC
GGCGCCTTTC GCATTGTCTT TATTGCCTTT GCGCTTCTGG CCTGTTTAGT AGGTCGTGCA
GTCAATATCT ACCCCATTAC GTATTTGTTC AACATGGTGG CTGGCCGGGG CAAAACGATC
CCTCCACCTA CTATTGGTAA CGAGTACGTG GCTGAGGGTA CCAGTAGGGA GGATGGCGTG
ATCTTGACCA GTCCAGGGGA AAGTATGACG GATGACTCGG TTATCCCTTG GAAGACGGCA
CATATGTTGT GGTTTTCGGG ATTGCGGGGA GCCGTTTCCT ATGGACTGGC TCGCATGTTT
CCACAAACGG AGAATCAGAG CATTTTTATC GCAACGACCA TGTTTATTGT ACTGACAACC
ACCTTTGTAC TGGGTGGAGC TACCGAGTCG GCTCTTCAAT TTCTCAAT
 
Protein sequence
SFSPSIFFVV LLPPIIFNSG YHLRRDLFFR NIVPICMYAC IGTAVCTMVV ASILYVCVPL 
FGFGFRPTFL ELAAFGALIS ATDPVSTLAV FQSKKVDPHL FYLVFGESVI NDAVGLVLFE
CLAHLIEKQQ NQLNVGQEFA QFLYDFSTGF LGSLVLGTLF AITYALLMKH VDMRKTPFLE
LCVYITMMYF PFVAAEILRL SGIVTVLFTG IASKRYVEPN VCAETAVNAD IVFRLVAHLT
ETIIFLDLGL SVFGLVGDGA FRIVFIAFAL LACLVGRAVN IYPITYFPGE SMTDDSVIPW
KTAHMLWFSG LRGAVSYGLA RMFPQTENQS IFIATTMFIV LTTTFVLGGA TESALQFLN