Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_54765 |
Symbol | |
ID | 7202813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 239255 |
End bp | 240563 |
Gene Length | 1309 bp |
Protein Length | 409 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182032 |
Protein GI | 219123439 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTACATCATG AAGTTACGAT CGTCGCTCTG CTTGCTTTCG GTTGTTACCT TCACTCTGCG AGCAGACACT ACAAGGACTG ATGCGTTCTC TCCAGCTGTG ATGTTCAAGC CCCGACGAGC TCCGGGTCGC CGCAGCTTTT CTGACACAAT GCGTCTCGAA GAAATGGCTC GACGCGATCT ACTGCTTTCA GGTGGGATTC TTTGGACTTC TTCGCAGGCA CACGCAGCCC AAATTGAGCC TCTTGCCGAT CTACCCATGA TTCGTCTAAA ACTCCCCAAG GCTGCGTTAG GACGAGAATA TGTCGCTCTT CGTCTCAGAG TCAACGGGCA AGGACCATAC GATTTCATGG TGGATTCAGG TTTGACAACT GAGTTGATTA CGCCCCACTT GCAACAGAGT CTAGGAATTG CGACAGGAAA GAATAAGCTT CAAGGATTGG CGTCGGGAGG TAGCACCCAA TCCAACGATC TTGTCAAGCT GACCGACGTG TCCCTTTGCT GTGGAAAATT CTCTGGGGAC AAGGAAATTG AGTTGCCTTC CCTTACTGCC GTCATTACAG ATTTTCCGCA AGAGCATATT GATCCGGGAC ATGATCCTGT CGAAGGAATG TTGGGTATGG AAGCACTTTC CCTCTTTGAC GTCGATTTCG ACTTTCCGGC TGGAAGAATA CGATTTTGGA AATCCGGAAC AGCGGCCGGG GCCGTCGGTA ACAAGCTCGT AGAAATTCCG GCGGTCGTCA TTAACGAAAC CGGCCTTTTA GGGATTCGGC TGTCAGCACC TGAAGCAAAC CAGCCAGTTC TCGGGTTTCT GGATTGTGGC GCGACCTTCT CGGCTGTGAA CTGGTCGGCG GCAAAGCTCT TGGGCTTGCC CGACAAAGGA GCTAGCGATT ATAAAACGGG ACCAGCAATT GATGCCATTG GGATCGACGG AAGGCCATTT CGCTTGCCGA CAATTAAAAA AGAGCTCACG TTTGTTGGCG ATGTTCAACA AGATTCGACA ACAGGTCGAC CAATTGGTTT TGACAAGCCC CCATCTTCAT GGAAGCCTTG GGAAAAAGTC GATCTGGCCG TTGGTGATCT GCCTGTTTTC CCCAGTCTCC TCGGAGACGG TACGCGACCA TACATGGGAC CAGCCGCACT GATTGGTTTG GACGTCCTCT CCCAACGTCG TGTCATTCTT GAGGCTGGTA GACCTGGAAC CAGGAAACGG CGTGTCTTCG TGAGTGGTTC GAGCTAGGCC AGGGGCAAGG AGAGTATCCA ACTATCAGCA TCTAAGAAAC TGGCATAACT TGTATGCCGC CGCCTCTGC
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Protein sequence | MKLRSSLCLL SVVTFTLRAD TTRTDAFSPA VMFKPRRAPG RRSFSDTMRL EEMARRDLLL SGGILWTSSQ AHAAQIEPLA DLPMIRLKLP KAALGREYVA LRLRVNGQGP YDFMVDSGLT TELITPHLQQ SLGIATGKNK LQGLASGGST QSNDLVKLTD VSLCCGKFSG DKEIELPSLT AVITDFPQEH IDPGHDPVEG MLGMEALSLF DVDFDFPAGR IRFWKSGTAA GAVGNKLVEI PAVVINETGL LGIRLSAPEA NQPVLGFLDC GATFSAVNWS AAKLLGLPDK GASDYKTGPA IDAIGIDGRP FRLPTIKKEL TFVGDVQQDS TTGRPIGFDK PPSSWKPWEK VDLAVGDLPV FPSLLGDGTR PYMGPAALIG LDVLSQRRVI LEAGRPGTRK RRVFVSGSS
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