| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54754 |
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| Symbol | hUba1 |
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| ID | 7202783 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | - |
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| Start bp | 3178 |
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| End bp | 6947 |
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| Gene Length | 3770 bp |
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| Protein Length | 1050 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | ubiquitin-activating enzyme E1, protein 2 |
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| Protein accession | XP_002181983 |
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| Protein GI | 219123337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.13153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTTACCCCGT GCCAACAAGC CCTTCTGGAA CCGAGACAAC CGACGGACGC TGCTAACGAA
CCAGACTTTC GCTCGTAGAC ACAATCTACA CGAAACAACG CAGCCTTCCT AGAGTGACCC
GCTTTGGCTT CGTGTTTACA GATAAAACAA TCCACAAACA CACGTATCCT ATCTCAATTC
CTTTCGACTC CCTAGTGATT TGCCTTTGTA ACACTATGTC TGCCGAAAGG ATGGAAGCAA
CAGCAACTGC CGAAGGTACG AACGATTCCT TACACGACAG CAGCTGCCGG GCATACACTC
GGCGTTTAGT TTCGCCTAGC GAGCGGCAAG CAACGACGAC TTGAATTCTT TTTTCGAAGA
CGACGGATGT GGACATCCTG TATTTCCTCG TTCGCTTTTT GTTGCACTGG CCTGGGGCGT
GTCAATACGC TTTTGGTTGT GCCCCAATGA CAGTGAGAGC CTCCCCGAGT TTGCGTTTTG
CGTGCGTTTT CTAATGGAAA GCTTGGTTTT CTTCTCACTT GTTCCTGCTT TTAACCTTTT
GCCAGTGGAT GAAAAGCTTT ATTCGCGCCA ACTCTACGTT ATGGGACATG AAGCTCAGCG
TCGTATGATG GCCAGCAATG TGTTGTTGGT TGGTTGCTCC GGTTTGGGCG TGGAAATCGC
CAAGAATTGC ATCCTTGCCG GGATTTCTTC CATGATGTTG GTCGATCCAA CGCCGCCTAC
TTCCTTTGAT TTGGGCGGAA ATTTTTACCT GCAAGAATCT GATATTGGCG GAACGAAGGG
ACGAGCCGCC CTGTGCAAAG ACTCTTTGGC GCAACTCAAT CAATACGTCA GCGTGACGAC
GGCGGACGTT CCGGATCTCT CCGTTGACTC AGTTCTTCCG TTGATCGATG GAAGCCTTAC
CTGTGTCGTC GTTACGGTCC CGCTGCCCAA GGCATTGGTC ATTCAGCTCA ACGAAGCCTG
CCGTGAACAA AAAGTGTCCT TCATTTATTC ACTCACCATG AGTGTTTTTG GTATGGCCTT
CTGCGACTTT GGAGACGCCT TTGTGGTGGC CGACAAGGAT GGCGAAGCCG CCGCCACGTC
TCAAATCGAA TCTGTTGTCC ACGAGAATCC CGCTGTCGTC AAAGTCTTGG AAGATCACGG
TCGTCATGGT TTGGAAGACG GCGACAAGGT CAGCTTTGCC CGTTTGCACG GGGTCCCTGG
GTTGGAAGAA GGCAGGGAGT ACGCCATCAA GACAACCGGA CCATTTACCT TTGAGTTGCC
GGAAGTCGAT CTCAGTGGAA TTGCCGACGG GGACGGTGCC GGGCACGCAG TCAACCAACA
AGGTTACATC ACACAAATCA AGCAACCGGT TACACTGAAG TTTGAATCGT ACGCTGAAAA
ACTGGAAAAG CCCGGGGAGC TCATGATGTC GGACTTTGCA AAGTTTGACC GCCCACCTCT
ACTGCATCTA GCATTTCAAG CCGTTGCGGC GTATTTGGAT GAAAAGGGTG AATTGCCAAT
GCCAGGGGAT GTGAATACAG CTAAAGAAGT GTTGGCGCTG GCCAATACAC TCGATAAAGA
AGGGATTCTC AAGTCCAACT TTCAGGTTGC CGAGCGTCTC TTGATGCATT TTGCATCTGG
TGCGCGGGCG TGCCTTTCGC CCATGTGCGC AGCACTTGGA GGCATGGTGG GCCAAGAAGT
TCTCAAGGCT TGCAGTGGCA AGTTTACACC TATTCCAGGT TTCTTCTACC TCGATGCTGA
CGAAACCCTG CCCGATACGT TGATCGACTC CTCCTTGGTC CAACCAACGG GCACGTCACG
CTATGATAGC CAAGTTGCCG TGTTTGGGAG CGACATGCAG GAAAATATTA ACAACTTGCA
GTACTTCATG GTCGGCGCTG GGGCAATCGG CTGTGAAATG CTGAAAAACT GGGCACTCAT
GGGGGTTGGC TGTTCGTCCA AGGGACACGT ATACGTGACC GACATGGATC GCATCGAAAA
GTCGAACTTG TCGCGTCAAT TCTTGTTTCG CAACACCGAT ATTGACAAAT TCAAGTCGGC
CACCGCTGCC GACGCGGCGA AAGCCATGAA TCCAAAGCTC AACGTTACGG CGTACCAGGA
AAAAGTGGCG CAAGACACAG AGCACCTGTT CGGTGACGAC TTTTACGATA AGCTCAGTGG
TGTTTGTACG GCCTTGGACA ATGTTGAAGC GCGTCTTTAC GTCGATCAGC GCTGTTTGTT
CTATCGCTTA CCAATGCTGG AATCTGGCAC ACTTGGTACC AAGGGCAATA CACAAGTAGT
TGTGCCACAT TTGACGGAGC ATTATGGCGC CACCCGTGAT CCACCAGAAA AATCCATCCC
AGTTTGCACG CTTAAAAACT TTCCGAACCA GATTCAGCAT ACGCTGCAGT GGGCGCGTGA
TTGGTTTGAA GGTGCGTTCA AGCAATCGGC CGATGAGGTC AATGCTTACC TTTCCATGCC
GCCATCTCAG TACTTGGAAA CATTGCAACC CAATACCAAA ACCGAGTCAC TCAAGTTGTT
GCGTCGCACG CTGGTGGATG AACGCCCTTT GACATTCGAG GACTGTGTCA CCTGGGCTCG
TCTGACATTC GAAAATCTCT TCAACAACCA AATTCGGCAA TTGCTGTATA ATTTTCCGCC
AGATCAAGTC ACATCGAGTG GCACAAAATT TTGGTCCGGG AGTAAGCGTT GTCCGAAACC
GCTCGTGTTT GATATTGACG CTGTAGATGA AGACGCAGGG ATGCGCAATC ACTTTGATTT
TGTTGTGGCA GCCGCCAACA TGCGAGCCCA ATTGTACGGT ATCAAGGGAC GCACCGATGA
AGACTACTTT CGGCAAACGC TCAAGGATGT GATTGTGCCT GACTTTTCTC CAGCCGAGGG
AGTAAAGATT GCGGCTAACG ATGAGGAAGC CAAGGCGACG GATGGGAACG GGATGGATAC
CGGCGATGCG GAAGCGGACG AACTTTGGGG CAGTCTGCCG AAGCCCTCTG AACTTGCAGG
ATTTCGGTTA CAGGGCATCG ATTTTGACAA GGATTTAGAT GAACAGATGC TCTTTGTCAC
GGCGTGTTCT AATCTTCGTG CCATGAATTA TCAAATTCCA ACGGAAGACA CACATCGCTC
GCGCGCAATT GCCGGACGTA TTATTCCTGC GATTGCGACG ACAACCGCCT TGGTCACCGG
TCTAATTTGC CTAGAGCTTT ACAAAATGGT AGGTACGGCT CGCAAGAAGC TGTCAATTGA
CGCCTATAAA AACGGCTTCA TCAATCTAGC CATTCCCTTC ATGACCTTGT CCGAACCAAC
AGCTCCTGCC AAGACCAAGG CACTTGTCAA GGGCAAAGAA TGGGAATGGA CGCCTTGGGA
TTCGTTGGAT ATGAGTCTTG GCGACATCAC TATGGGCGAA TTTATGGATT ATTTTGAAAA
TGAATACAAT TTGGAGATTT CCATGCTCAG CCATGGGGTG AGCATCTTGT ACAGCTTTTT
TGCCAATAAG AAAAAGGTGG AAGAGCGCAA AAGCATGAAA ATGACGGATG TGATTACATC
CATTACAAAA AAAGAGTTTC CGTCCAACCA GCTCTTCATC ATTTTGGAAA TAATTGCAAA
TGATAAGGAC ACGGACGAGG AAGTTGACCT GCCGTATGTG CGCTTTCGTT TCCGATGAAC
ATGGTTGGAA AGCAGTGTTT TGCAGCCTTG TAAGGCTGGT CAGCTGATAG CAACGTTCCA
TAACTTTTAA AAGGAAGCCT GTTGCGACAA TACTTTGTGT GACCTACATT
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| Protein sequence | MSAERMEATA TAEVDEKLYS RQLYVMGHEA QRRMMASNVL LVGCSGLGVE IAKNCILAGI
SSMMLVDPTP PTSFDLGGNF YLQESDIGGT KGRAALCKDS LAQLNQYVSV TTADVPDLSV
DSVLPLIDGS LTCVVVTVPL PKALVIQLNE ACREQKVSFI YSLTMSVFGM AFCDFGDAFV
VADKDGEAAA TSQIESVVHE NPAVVKVLED HGRHGLEDGD KVSFARLHGV PGLEEGREYA
IKTTGPFTFE LPEVDLSGIA DGDGAGHAVN QQGYITQIKQ PVTLKFESYA EKLEKPGELM
MSDFAKFDRP PLLHLAFQAV AAYLDEKGEL PMPGDVNTAK EVLALANTLD KEGILKSNFQ
VAERLLMHFA SGARACLSPM CAALGGMVGQ EVLKACSGKF TPIPGFFYLD ADETLPDTLI
DSSLVQPTGT SRYDSQVAVF GSDMQENINN LQYFMVGAGA IGCEMLKNWA LMGVGCSSKG
HVYVTDMDRI EKSNLSRQFL FRNTDIDKFK SATAADAAKA MNPKLNVTAY QEKVAQDTEH
LFGDDFYDKL SGVCTALDNV EARLYVDQRC LFYRLPMLES GTLGTKGNTQ VVVPHLTEHY
GATRDPPEKS IPVCTLKNFP NQIQHTLQWA RDWFEGAFKQ SADEVNAYLS MPPSQYLETL
QPNTKTESLK LLRRTLVDER PLTFEDCVTW ARLTFENLFN NQIRQLLYNF PPDQVTSSGT
KFWSGSKRCP KPLVFDIDAV DEDAGMRNHF DFVVAAANMR AQLYGIKGRT DEDYFRQTLK
DVIVPDFSPA EGVKIAANDE EAKATDGNGM DTGDAEADEL WGSLPKPSEL AGFRLQGIDF
DKDLDEQMLF VTACSNLRAM NYQIPTEDTH RSRAIAGRII PAIATTTALV TGLICLELYK
MVGTARKKLS IDAYKNGFIN LAIPFMTLSE PTAPAKTKAL VKGKEWEWTP WDSLDMSLGD
ITMGEFMDYF ENEYNLEISM LSHGVSILYS FFANKKKVEE RKSMKMTDVI TSITKKEFPS
NQLFIILEII ANDKDTDEEV DLPYVRFRFR
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