Gene PHATRDRAFT_5235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5235 
Symbol 
ID7202828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp332081 
End bp332869 
Gene Length789 bp 
Protein Length263 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181885 
Protein GI219123133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.540131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGTCGTTCA TTTTTCCACG TTTTCCTAAG AGTGAGAAGG AAAGCTTGTT TATTCATGAC 
GTTCTGATGC AAAATTTCAT CTTCATGGAC TTGTCCACTG AAGAGTGCGA CCAATTTGTC
GACGCGATGC AGAAAGAAGT TGTTGGACCG GGAACTCCCA TAATCACGCA GGGTGCTATT
GGTGACTATT TCTACATCAT TGAAAGTGGA ATGGTCTTGT ACATGGACGA AACGAAAGAT
TCGGGCAAAC AAGTCGTCGG AAAGGCATAT AGCGGCAGTT CTTTTGGGGA ATTGGCATTA
TTATACGACT GTCCTCGAGC TGTATCATGT GTGGCAGGCC CCGACACTCA AGTTGTTCTC
TGGAAAGTAG ACCAGAATAC CTTTCGCCAT TTAGTAGCTC GCCAAACACA CGATCATGAG
CAGGAGATGA AGGATCTCGT CCGGAAAATT GACATTTTCA AAAATCTTGA AGACCATGCC
ATCACGAAGT TTACCAATGC TATGACTCCT GTCCACTGGG AAGAAGGGGC AAGAATTGTT
CAAAAAGGGG ACGAAGGAAA TGTTTTTTAC ATCATAGAGT CCGGAAACGT GAAAATCCAT
GACATAGGAT TGGGTGATAG CCAATTCGAA GATCAAATCG TGGGACCAGG TGGCTGGTTT
GGAGAAAGGG CCCTACTTAC TGGCGAACAC CGGGCTGCGA ATGTGACGGC AATGAGCAAG
GTGACCACCC TCGCAATGGA CCGAGAGACA TTTGAGGCGA CTGTCGGTCC CCTTAAGAAT
TTTCTGGAA
 
Protein sequence
QSFIFPRFPK SEKESLFIHD VLMQNFIFMD LSTEECDQFV DAMQKEVVGP GTPIITQGAI 
GDYFYIIESG MVLYMDETKD SGKQVVGKAY SGSSFGELAL LYDCPRAVSC VAGPDTQVVL
WKVDQNTFRH LVARQTHDHE QEMKDLVRKI DIFKNLEDHA ITKFTNAMTP VHWEEGARIV
QKGDEGNVFY IIESGNVKIH DIGLGDSQFE DQIVGPGGWF GERALLTGEH RAANVTAMSK
VTTLAMDRET FEATVGPLKN FLE