Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5235 |
Symbol | |
ID | 7202828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 332081 |
End bp | 332869 |
Gene Length | 789 bp |
Protein Length | 263 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181885 |
Protein GI | 219123133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.540131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAGTCGTTCA TTTTTCCACG TTTTCCTAAG AGTGAGAAGG AAAGCTTGTT TATTCATGAC GTTCTGATGC AAAATTTCAT CTTCATGGAC TTGTCCACTG AAGAGTGCGA CCAATTTGTC GACGCGATGC AGAAAGAAGT TGTTGGACCG GGAACTCCCA TAATCACGCA GGGTGCTATT GGTGACTATT TCTACATCAT TGAAAGTGGA ATGGTCTTGT ACATGGACGA AACGAAAGAT TCGGGCAAAC AAGTCGTCGG AAAGGCATAT AGCGGCAGTT CTTTTGGGGA ATTGGCATTA TTATACGACT GTCCTCGAGC TGTATCATGT GTGGCAGGCC CCGACACTCA AGTTGTTCTC TGGAAAGTAG ACCAGAATAC CTTTCGCCAT TTAGTAGCTC GCCAAACACA CGATCATGAG CAGGAGATGA AGGATCTCGT CCGGAAAATT GACATTTTCA AAAATCTTGA AGACCATGCC ATCACGAAGT TTACCAATGC TATGACTCCT GTCCACTGGG AAGAAGGGGC AAGAATTGTT CAAAAAGGGG ACGAAGGAAA TGTTTTTTAC ATCATAGAGT CCGGAAACGT GAAAATCCAT GACATAGGAT TGGGTGATAG CCAATTCGAA GATCAAATCG TGGGACCAGG TGGCTGGTTT GGAGAAAGGG CCCTACTTAC TGGCGAACAC CGGGCTGCGA ATGTGACGGC AATGAGCAAG GTGACCACCC TCGCAATGGA CCGAGAGACA TTTGAGGCGA CTGTCGGTCC CCTTAAGAAT TTTCTGGAA
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Protein sequence | QSFIFPRFPK SEKESLFIHD VLMQNFIFMD LSTEECDQFV DAMQKEVVGP GTPIITQGAI GDYFYIIESG MVLYMDETKD SGKQVVGKAY SGSSFGELAL LYDCPRAVSC VAGPDTQVVL WKVDQNTFRH LVARQTHDHE QEMKDLVRKI DIFKNLEDHA ITKFTNAMTP VHWEEGARIV QKGDEGNVFY IIESGNVKIH DIGLGDSQFE DQIVGPGGWF GERALLTGEH RAANVTAMSK VTTLAMDRET FEATVGPLKN FLE
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