Gene PHATRDRAFT_52268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_52268 
Symbol 
ID7202851 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp437352 
End bp438062 
Gene Length711 bp 
Protein Length209 aa 
Translation table 
GC content49% 
IMG OID 
Productlysophospholipase 
Protein accessionXP_002181908 
Protein GI219123181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAAGCGCGT TGGTAGTTAT TTCGCACGGT CTTGGCGATA GTGCGGAAGG TTTTGCTGAT 
GTAGCGGAGG TAAGCTTCAT CGTCAGAGAA AATTGGTTGA CCCAATGTAC AGCTTCCGAC
GAAGCTCTGA CTATTTTTTG TCGTTTATAT TAGACCCTGG CGATGCAAAT GCCTCACGTA
AAGTTTGTGT TACCAACGGC CCCTACGCAG CCTGTGACGA TGAACATGGG CATGTCGATG
CCGAGCTGGT ACGATATTGT CGGTTTGGAC GAACGGGCGA ACGAAAACTG CAAAGGTATC
GAAATTTCTC GAACTAGAAT CACGTCCATT CTAGAAGAGG AACATGCCAA CACTGGTTTA
CCCTATAGGC GCATGGTACT CGCTGGATTC TCTCAAGGTG GCGCCCTTTC CTTGTATACC
GGCTTGCAAT TGAAAGCAGA GCAAAAGCTA GCAGCGGTAA TAGTAATGTC GGGCTATTTG
CCGGCGGCCA AGACTTTTGC AGTTACTACA GGCTTGGAAA GTGTTCCCGT TCTGCATTGT
CACGGAACAC AAGATCCGGT AGTCCAATTT AGCATGGCGG CAAAATCGAA ACAGCGCGTT
CTGGAAAAAG GAGGCCAGCA ATACGAATTG AAATCATATC CCATTCCGCA CACGGTCAGT
CCTGCCGAGA TAAACGATGT GCTAAAGTTT CTGCAGAAAC AGCTCCCGCC G
 
Protein sequence
QSALVVISHG LGDSAEGFAD VAETLAMQMP HVKFVLPTAP TQPVTMNMGM SMPSWYDIVG 
LDERANENCK GIEISRTRIT SILEEEHANT GLPYRRMVLA GFSQGGALSL YTGLQLKAEQ
KLAAVIVMSG YLPAAKTFAV TTGLESVPVL HCHGTQDPVV QFSMAAKSKQ RVLEKGGQQY
ELKSYPIPHT VSPAEINDVL KFLQKQLPP