Gene PHATRDRAFT_47761 details

Gene Information

• Locus tag: PHATRDRAFT_47761
• ID: 7202924
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 755404
• End bp: 759069
• Gene Length: 3666 bp
• Protein Length: 1186 aa
• GC content: 54%
• Product: potential chitinase
• Protein accession: XP_002181971
• Protein GI: 219123312

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGTCGC CACCCCAAAT GATCAATCCG TACCGGAAAA GTCAACCGAC CAAAGTTTCC 
ACGGTAATCG CAACAAGTGC CACGGCACGA ACAGACCCGT CCCGTGTGCC AGCTTCCAAG 
TCACACCCGT TACGAATTCC GAATCAAAGT CTTGCGGATG TATCGGCGTC GAGCACTCAA 
GCTCCGGCTC GTCCATCCGC ATCCCTTCCG CCAGCTTCGT CATCGAGTTC GTCGTCTTCG 
CTCCCCAAGT CTTCTACGCT AGTCACGTCG TCCAAGTCCA CCGCCCCCAT TCCGACTTCA 
CTCCGATCCA AACTCAAAAA AGAAATTGAG AATCTGCGAC GTGCCAAGCT GTTGCAAGCG 
CAACGCATCG AAGCGGAAAA GCAACGCCAA CGACTCGAAA AGCAACGTCG CAAAGAAGCA 
GCGCGTACTC GTAAAAATGC CGCCGCCGTT GCAGCGGCAG CAGTAGCACC TGCCGAGGCA 
GTTCACGTGG CCTCCGGCAA CGAACCCCGT ATCAATCTAC CGAAAACGCC CGTTGCCGCC 
GCCACGGTAG CGCGTGCGGT GACAGCGCAC GCGCCCTTGT CCGATCCATT GTCCGTGCCT 
ACGAGCGCAA CGGCTCCCCC AACTCGTCTA ACGACCGAGG GAAACGAGCC TCCGACACGG 
CACGCAACCC AACCGGCAAC GGGTCCGTCC ACGAACGTTG CGCAAGTGAC CGTGACGCCT 
AGTCCCACTG TGCGTGTAAC AGACTCGGCG AATCATCCGT CACCGTCCAC TCTGCGCGTG 
TCAACAAATC CCGCATCGAC CCCCATGGCG ACTGCCGCTC AGGCTCCAGT GTCTGTGGAA 
AAGTACTCGA CTCCCGCCCA AACTGGAACT AGTCATTCGA ATCCTTCAAT TCTCCCACAA 
GCGTGGCGAC CATCGTTTCC CCCCGGCTTT CCGGTCGCTG CCGTGCACGG AACTGTCGGT 
CCTGAGTGGC CTTCCCCTTG GTACCCATGG CAAGGTCCAG TCCCACAGCA TCACCATCAA 
CAGCAATTCC AGACTCCCTA CGGCGGCGTT TGGAACATTC CAACGCAGAC GTCACCAGTC 
TTGGCGTCAG CAGGTCCAGC GACTTTGCCC AATAATTATC CTTATGGATA TTCGCTCCCT 
CCTTTCGCCG TACCGTTCTG GAACGGCAAC TTTGCACCGT TTTCGTCACC CGATCCTAAT 
TCGAACAACG ACACCTTCGC CGTCCAATCC CCACCACCGC TCGCTCCCTA CTCGTCTTCT 
AATCCACTCC TACCGAACAC GAAATCCACA AAACTTTCCC ACAGTGTCCG AGGCACCGCG 
GCGCTGGCAA AGAACAACGA TACCCTCTGT GACGCACTCA CCGTACCGTC GCCCTTTGCC 
GGGTCGTATG AACTGTTACC CACTCCCATT GTTGTTATTA AAAAGCCAAA CGAATCGTTC 
GGGGTCACGT TGCAGAAGGA AAGTCAAAGT GCGCTTGTCG AACCTGCGTG GTTGGTCAAA 
CACGGGCTGT TGCCGCCGGA TGCCGTGGAA GCATCACAGG GTGAAAAGGC GGTAGAACCT 
GAGGCAACGG TATCCTTCGT AGAGAGAAAG AACCTCACCA AGGCAACAGA CAAGGCCGTA 
CCGACCGAGA ACTCGATGCC TCCTACGATC GGAGAACCAG TCGCGGCCTT GCCGGAATCC 
AAAGAGACCC CTAGGCGTCG AAAGCCTCGT CGACGTCGCA TTACCTTTGC CACGATGGTC 
ATTCAGGATC CGACTATTCA GAATCAAGGG AACGCTATGA ATTCCCAGTC GCTGCAATCG 
GGTGACATTG TCATCGAAAT TGACAAACAG CCTATCGCGG GCAAGACTTT CCCTGAGGCG 
TGCTCATTCT TCCGGGACTG CCAGACGACT GATGCTGACG GGATAATTCG TTGCCCAGTT 
CGGGTGGCCC GACGAAAACA CTTGCCGTTG AAGCCATTGC CTATCGACCA GGTCACTTCA 
ATTAAGTTAG CTGCAGAGTC ATCGCCACCC CAAAGCATCG GTCCCATCAC CGAAAGTGAC 
CTCTTTGTAT TCGACGCCTG TCTTCTCAAC GCAACTATGG ATGCGGAGCG AGTATTGGGA 
ATGGTTCCAT CCGATGCTGT ACTTCAATCT TATGTAGATG CTGCGTTGGC TCTCAAAGGT 
AAAAGCCTTG GCACGTTGCA AAGCGCATGG CGTGGTGTGG CAGCGACGGT GGAACAGCGC 
ATGGCACAAA GGGCCGCTCA GCATTGGACA GAGCAATGGC AAGCGGAACC AATTGAATTT 
CGTTCCACCC CGCGCAGAAT CTTGTCTGAC GCTCAGCGCA GTACTCTCCG TATGGCATCA 
CGCCCCGCCA AGGGTTGCCG ATGCGGTAGT ATGGAGCACG ACTACGTTCA CGACAGCAAG 
TGCCAGTTGT ATAGCAACTT GCGGCTTGTC GATTCCTCCG GGTCCAATGC TTTGGACCCA 
AAGACTCGAG ACCGCTTACT AGCCGCCAAA TTACCGAAGG ATTTGAACGC TGTAGAGACT 
GCTTTCAAAG ACCGATTCGT CCGCATACAA AATGAGAAAC AGGCAGAAAA GATAGAGGCG 
GCTTTCGTCT CCAAAATGGA AGAGTTACAG TTGGCACAAG GCAAGGCAAT TTTAGCGCCC 
TCTTTGACCA CCATGGTTTT GTCGGCAGCT GTAGAATTAC AATCTGAGAT TGTCTCGAAT 
TCGCCGTTTC GACCGGAGTC TTTAGTAATC GTGGACGAAC CTAGTGTTGA CCTAAAAACA 
TCCACAAACG TCACGACTGG AGGAAATGGC GAAGACTCGG ATGAGGATGA TGACGTTCCG 
TTAAGTGCTC TCGGAAAGCG CCCGGCCGCC GAGATGAAAT CCAATACGGC GAAAAAAAAT 
AAGCCCGAAA TAATGATTAG TCGCGGCTAC CTCGCCAAGC TGCTGTTGTT GATCAGTGAC 
AAGTGGGGCC ACTTGTACCG CGAACCATCT GATGTTGAGT ACGCGTGGTA AGTCTGATAG 
TCGGTTTTAC TGTTGCAAAA ATTGCTAGAT GCCTTAAGCC GAAATTTACC CTCCAACTAT 
TTCCCAGGCG CTGGGAAGTG TATCATGGTC AAACGTCTGA TTGTGCATCG CAGTGGAAGC 
CACACGCAAA AAATCCTCGC CAGGAAGGAT CGAGGAGTCT AGAAAACATA CGATTTGTGA 
TTGATGATTC CGTTTTGGCA ATCGTTGAAT CCCGCAGCGC TTCGATGAAG GAGTACAGCG 
AAGCGTTCAA AGTACTGTCA TATATTTCGA GCACAAGTCG GACTGGTGTC TGCGAAGAGC 
TGGCCGCTTT ACTTCGCATG GGTGTCCTTC ATGTCGATAA GACTGGCATT CCGGTTCTTG 
CAAAGAAATG GTATGAACGG GTTGACCTGT TGTTACTAGA AGACATGCAC TTCAGTTGGG 
GCACGCAGGC GGATATGAGT GGAAGGTTTG CGATTTCTGA GACTCTGCGA CGGCGCCTCG 
AGAAGCGGTG GACGAGAACG GCGCAGGGGT GGGCACTAAA TAACTATGTG GACGACATCG 
TTTTCGATTT TGTTGAGTTT GACGAGTGGC GAGCAACCTT TGAAGACAAG CAGCAGTCTA 
CGACCGAAGC TATTGAAGGT ATTGGAAAGT TCGGCATTTA ACCGTGTGCA GTCGTTATAA 
AGCTAG 

 

Protein sequence

MSSPPQMINP YRKSQPTKVS TVIATSATAR TDPSRVPASK SHPLRIPNQS LADVSASSTQ 
APARPSASLP PASSSSSSSS LPKSSTLVTS SKSTAPIPTS LRSKLKKEIE NLRRAKLLQA 
QRIEAEKQRQ RLEKQRRKEA ARTRKNAAAV AAAAVAPAEA VHVASGNEPR INLPKTPVAA 
ATVARAVTAH APLSDPLSVP TSATAPPTRL TTEGNEPPTR HATQPATGPS TNVAQVTVTP 
SPTVRVTDSA NHPSPSTLRV STNPASTPMA TAAQAPVSVE KYSTPAQTGT SHSNPSILPQ 
AWRPSFPPGF PVAAVHGTVG PEWPSPWYPW QGPVPQHHHQ QQFQTPYGGV WNIPTQTSPV 
LASAGPATLP NNYPYGYSLP PFAVPFWNGN FAPFSSPDPN SNNDTFAVQS PPPLAPYSSS 
NPLLPNTKST KLSHSVRGTA ALAKNNDTLC DALTVPSPFA GSYELLPTPI VVIKKPNESF 
GVTLQKESQS ALVEPAWLVK HGLLPPDAVE ASQGEKAVEP EATVSFVERK NLTKATDKAV 
PTENSMPPTI GEPVAALPES KETPRRRKPR RRRITFATMV IQDPTIQNQG NAMNSQSLQS 
GDIVIEIDKQ PIAGKTFPEA CSFFRDCQTT DADGIIRCPV RVARRKHLPL KPLPIDQVTS 
IKLAAESSPP QSIGPITESD LFVFDACLLN ATMDAERVLG MVPSDAVLQS YVDAALALKG 
KSLGTLQSAW RGVAATVEQR MAQRAAQHWT EQWQAEPIEF RSTPRRILSD AQRSTLRMAS 
RPAKGCRCGS MEHDYVHDSK CQLYSNLRLV DSSGSNALDP KTRDRLLAAK LPKDLNAVET 
AFKDRFVRIQ NEKQAEKIEA AFVSKMEELQ LAQGKAILAP SLTTMVLSAA VELQSEIVSN 
SPFRPESLVI VDEPSVDLKT STNVTTGGNG EDSDEDDDVP LSALGKRPAA EMKSNTAKKN 
KPEIMISRGY LAKLLLLISD KWGHLYREPS DVEYAWRWEV YHGQTSDCAS QWKPHAKNPR 
QEGSRSLENI RFVIDDSVLA IVESRSASMK EYSEAFKVLS YISSTSRTGV CEELAALLRM 
GVLHVDKTGI PVLAKKWYER VDLLLLEDMH FSWGTQADMS GRFAISETLR RRLEKRWTRT 
AQGWALNNYV DDIVFDFVEF DEWRATFEDK QQSTTEAIEG IGKFGI