Gene PHATRDRAFT_47747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47747 
Symbol 
ID7202732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp716769 
End bp717748 
Gene Length980 bp 
Protein Length257 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182121 
Protein GI219123621 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.396172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCACGTTCAA AGCTCCTCGC AAAGTTGAAG AAGCATTCTG CCCCCCGCTT TGTTTACATA 
ACTTTTCCAG CAAAAGAGCT TCATATTCTT TCACTTTTAT TCTGCACTCA TGCTTACTGC
TTCATCTTCG CATACGTTTG CAATCGAGCC GCCTTCTTCC GGTTTGAAGG ATGAGAACAT
CAGCTTTGGA TGGGCCGACT TTCCATTGAT CGGTGATGGG GACGATCGTA CTTCACATTC
AGTGCCTATA AGCCCTGCTT CTACCAATTC CACAATTGAA TTCACCGAAA GCAGTCCGGA
AACGAAAGAA GAAGAATTTT CCGTTCTTTC ACCCGCCTTT TTGAAACAAG ACTCCGATCT
CACATGCCCC ACTATGATCG AATCCAGTGA TTCCGATTTC GATGAAGACG AAGGTTCGTT
ATTTTCATCG ACCGACGACG CAGAGGGTGC TATTGTTGTG GACAACACTT CAGCAGGCGT
ACGGTTTTCC TCCGTTTGCG TGCGAGAATA CAACCTCACG GTGGGGGATC ATCCCTTGAC
CGACGTTTTT CCATTGGCCC TGGACTGGGA TTTTGTTGAA GGCGAAAGTA TTCCCATTGA
TATTTTTGAA GCCAAGGCAA AACAACGCAA ATGCTCGTGG ACACGACATA AAGCCTCGCG
GTTGGCTTTG TATCAGAGAA CTTACAGGTT GCAAGTTGTT TCGGGATTGT CATACGCAGA
CATCCTGGAA TTGGAACAGG CTCGGCTCGA ACGGCAACGA CAGGACTGCG AAAGTGAAAG
CCCTTCTTGT ACAGCAGACG CTTTCCGAGC GCAACTCCCA AAAAGTCAGT CTCTTACCAA
TTTGCGCGAA TCTTTGGCTC GGGTGGGTTT GGAAATGATA TGACAGATGA TGGTTCAACC
TTTGATGCTC ATGTGCCTTG CCATAGCTTT GGAAATTTGA ATGCATAGAA TATACCACAC
ACATCGCTCA ATTTTTATTT
 
Protein sequence
MLTASSSHTF AIEPPSSGLK DENISFGWAD FPLIGDGDDR TSHSVPISPA STNSTIEFTE 
SSPETKEEEF SVLSPAFLKQ DSDLTCPTMI ESSDSDFDED EGSLFSSTDD AEGAIVVDNT
SAGVRFSSVC VREYNLTVGD HPLTDVFPLA LDWDFVEGES IPIDIFEAKA KQRKCSWTRH
KASRLALYQR TYRLQVVSGL SYADILELEQ ARLERQRQDC ESESPSCTAD AFRAQLPKSQ
SLTNLRESLA RVGLEMI