Gene PHATRDRAFT_47746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47746 
Symbol 
ID7202916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp714100 
End bp715023 
Gene Length924 bp 
Protein Length271 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181960 
Protein GI219123290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.649636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTAT CAACCGTGCA AGTCATCACG ATGAGAGCTT TTCTTCTCCT TCTACTAAGC 
AATTTGCCTA ATTTCAGCTG TTGCTGGGTA CCCATGTATG CACCATGCCG TGCCCTTCAC
CGACGTTCGA CAAAAATTGG CGTGAAAAAC ATCCTTTCGG ATATTGGGGA CATGCTGTTT
GGCGGAGACC TGGTACCGCA AGCGACCTTG CCCTACGGAA AATCATTGGA CGTGGTCAAC
GCGGACGAAT CGACCGTCTA CGCGGTACAG GAACGTGGGA TCAGCTTCTC GGGTGAGGAC
TTTGACGTAT GGGACACGTT TACGAATACG CAAAGGTACT GGGTGCGCGG CGCGATGCTC
CATCTTCCTG GCAAGGATAA GATGAGAATC CTGGGACCCG ATAGTCAAGT CAAAGCAATA
CTGGAGCGCA AAATGCCGTC ATTAAAACCA ACCTACGATA TTTACCGAGG ATACGGCAAC
GAAAAGATTG GTTGGATAGA GAAGAAGACA TTTGCGTTGA TGGATACGTT TGAAGTGTTT
GTTGAAGCCG AAAAGAGAGG ACCGTTCGGT TCGTCAACGC CCGCATTCAA GATCGAAGGT
GACTTTCTAG ATTACCGATT CTCTTTTAAA AACTCGAAGG AAGAAGTTGT TGCGAAGGTG
AAGAAAGACG GATGGGTTCA GTTTGACGCG TTTAACCACT ATCAAATCGA GGTTGCCCCA
GGAATGGATC CGTTGCTTGT AATTGCATGT GCGTGCGCTA TCGACGAAGA ATTTGACGAG
GAGCACAAAA AAGAAAGCTT AGCGAAGAAA GATTGATAAT ATTTCCAGGC CAGGCTAGTA
GAGCCAAAAT AGCAGGTCGC TCCGCTATCA TACATTTACA ATTACTACCG GATAAGCAAT
ATCGACTTAC AAGGACAATC ATAA
 
Protein sequence
MVLSTVQVIT MRAFLLLLLS NLPNFSCCWV PMYAPCRALH RRSTKIGVKN ILSDIGDMLF 
GGDLVPQATL PYGKSLDVVN ADESTVYAVQ ERGISFSGED FDVWDTFTNT QRYWVRGAML
HLPGKDKMRI LGPDSQVKAI LERKMPSLKP TYDIYRGYGN EKIGWIEKKT FALMDTFEVF
VEAEKRGPFG SSTPAFKIEG DFLDYRFSFK NSKEEVVAKV KKDGWVQFDA FNHYQIEVAP
GMDPLLVIAC ACAIDEEFDE EHKKESLAKK D