Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47746 |
Symbol | |
ID | 7202916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 714100 |
End bp | 715023 |
Gene Length | 924 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181960 |
Protein GI | 219123290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.649636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTTAT CAACCGTGCA AGTCATCACG ATGAGAGCTT TTCTTCTCCT TCTACTAAGC AATTTGCCTA ATTTCAGCTG TTGCTGGGTA CCCATGTATG CACCATGCCG TGCCCTTCAC CGACGTTCGA CAAAAATTGG CGTGAAAAAC ATCCTTTCGG ATATTGGGGA CATGCTGTTT GGCGGAGACC TGGTACCGCA AGCGACCTTG CCCTACGGAA AATCATTGGA CGTGGTCAAC GCGGACGAAT CGACCGTCTA CGCGGTACAG GAACGTGGGA TCAGCTTCTC GGGTGAGGAC TTTGACGTAT GGGACACGTT TACGAATACG CAAAGGTACT GGGTGCGCGG CGCGATGCTC CATCTTCCTG GCAAGGATAA GATGAGAATC CTGGGACCCG ATAGTCAAGT CAAAGCAATA CTGGAGCGCA AAATGCCGTC ATTAAAACCA ACCTACGATA TTTACCGAGG ATACGGCAAC GAAAAGATTG GTTGGATAGA GAAGAAGACA TTTGCGTTGA TGGATACGTT TGAAGTGTTT GTTGAAGCCG AAAAGAGAGG ACCGTTCGGT TCGTCAACGC CCGCATTCAA GATCGAAGGT GACTTTCTAG ATTACCGATT CTCTTTTAAA AACTCGAAGG AAGAAGTTGT TGCGAAGGTG AAGAAAGACG GATGGGTTCA GTTTGACGCG TTTAACCACT ATCAAATCGA GGTTGCCCCA GGAATGGATC CGTTGCTTGT AATTGCATGT GCGTGCGCTA TCGACGAAGA ATTTGACGAG GAGCACAAAA AAGAAAGCTT AGCGAAGAAA GATTGATAAT ATTTCCAGGC CAGGCTAGTA GAGCCAAAAT AGCAGGTCGC TCCGCTATCA TACATTTACA ATTACTACCG GATAAGCAAT ATCGACTTAC AAGGACAATC ATAA
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Protein sequence | MVLSTVQVIT MRAFLLLLLS NLPNFSCCWV PMYAPCRALH RRSTKIGVKN ILSDIGDMLF GGDLVPQATL PYGKSLDVVN ADESTVYAVQ ERGISFSGED FDVWDTFTNT QRYWVRGAML HLPGKDKMRI LGPDSQVKAI LERKMPSLKP TYDIYRGYGN EKIGWIEKKT FALMDTFEVF VEAEKRGPFG SSTPAFKIEG DFLDYRFSFK NSKEEVVAKV KKDGWVQFDA FNHYQIEVAP GMDPLLVIAC ACAIDEEFDE EHKKESLAKK D
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