Gene PHATRDRAFT_47742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47742 
Symbol 
ID7202913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp702081 
End bp702601 
Gene Length521 bp 
Protein Length138 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182118 
Protein GI219123615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.111041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCTAACCT CTAGTCGGTA CCATGTCTGT CGATTTGTCT TCGTCTCCCG CCGCTCTCAT 
GGCCTTTGCG GCCTGGATCG CTTTCCACAT GATGGTTATT ATGACCTACC GTGCCACGTT
GGTCATCACG GGTAAAAAAG TCAACACGTT TGGTCCATCG CGCAGTGATT CGCAAAGCTC
GTTTATTGGT CGCGTGGGTA GCTCGCACGC CAATTGTCTG GAGAACTTTC CTCTTTTTCT
AACGGTCGTG ATGGTGAATA CCGTGACGAG TGGACCCGAC ATTAGCGAGT TGGCCTGGCA
CTACGTGTAC GCTCGCGTCG CGCAGTCGCT GGCGCATTGG TACAGCTTTT CGGAGCTGAC
TGTGATGGTG CGTTTGACGA ACTTTCTCGT CAGCTGGGGA CTACTGGTTA CCATAGGATA
CCGTACCATG TATCATTGAG TGTGACCTTG CTGTCGCATG TATTTGTATG GGGATTCAAT
TTTGGATGTT GTCGCGGTGG TTGATCCCAG CATTGTAGGG A
 
Protein sequence
MSVDLSSSPA ALMAFAAWIA FHMMVIMTYR ATLVITGKKV NTFGPSRSDS QSSFIGRVGS 
SHANCLENFP LFLTVVMVNT VTSGPDISEL AWHYVYARVA QSLAHWYSFS ELTVMVRLTN
FLVSWGLLVT IGYRTMYH