Gene PHATRDRAFT_47730 details

Gene Information

• Locus tag: PHATRDRAFT_47730
• ID: 7202908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 664210
• End bp: 667744
• Gene Length: 3535 bp
• Protein Length: 1085 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002181948
• Protein GI: 219123265

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGATAT CCAGTAAGAC GATTCTGGCA ATGCTCGGTG CTTCGTTAGG GTGGACGACG 
GCCTTGGTCG TGGACGTACC TCACCGTCCC TGGTCGACGA GCTCCCGGAC GCGAAGTACC 
AGTGCGATCG GCAACGGCAA CGGCGACATG GACTACGATT CGTCGGCGAG GGCGGGAGCG 
GACGGATACT CGGTACTGCG ACAACCTGCC TCCCGTTCCA ATTGGGACCC CAACTTGGAT 
CCGGAGTTCG AGGTTCCTCT TTCCTTGGAT CAAGCCCAAT CGTCCTTTCA AACACAAGAC 
GACTATTGGT GGAACAATGA AGTTCAAAAG GCCAAACCGA AACAATCAAT CCAACGATCG 
TCGTCAGTCA CCGCTTCCTC TGTCACGACT GCGAGCGATC GAGAGCCTGC CAACAATGCC 
ATTGCCAAAC CCGAGGATCT CGATTTGTTT CAACGATCTC TCGACACGCT CGATTATCCC 
CGTGTCTTAC AGGCCCTGGA GGAGCAATGC ACGACGGTTC CAGCGCGACT CATGGTTCGG 
CAAGCATCCC ACGATTTGAC CACCAATGGT ACCAGTACAA TCCAGTCGAA GAAAAGTAAA 
CGCATACCCA AAGGCTCCGA ACGTGCCTTC CAACCGCTGA CGGCCGACAC GGTACTGGGC 
ACACAAGAAC GATACCGAGC AGTGCAAGAA CTGGAATGGA TCCTCCAAGG TGGATCGGGA 
CAGATTAATT TGGCCGACTA CAGTTACCGC AATCGCAAAA GCTACAAGGA AACCCTGGCG 
GGCAAACCAC CACCGCTCGG CGGGAACGCG TTCGATTTAC TGGCCATTCT CGCCGTGGCT 
GAACAGGGCA AAGTACTCGA AGGGGAAGAA ATATTTGACG TGTCCCAAAT GCTTGATCGT 
ATGCAAGATG TACGGTTGTG GAGCGACGAC GGTCTCCTGA ACGTGAATCG ACTGCAACAG 
GACATTGAAT TTGTTGAATT GCCCAAACTA GCGTCCTGCA TCCAAGTCAA TACGACTCTC 
CAAGATTTGC TGCACAACGC CTTTGACAAG GACGATCGAT TGAGCGGCAC GACATTTCCA 
GTACTGGGTC GTTTGCGTGC CCGGGTACGA TCCTTAAAAG CCGACATTAT GGGAACGCTC 
GATAGCTTGT TGGCCTTGCC CTCCATCAAG AACAAACTGG CGTTGGAAAG CGGCGGTCCG 
ATCTATTCCG AAGTCAACGG TGGTCGCCTA GTACTGCCCG TGGCACAAAA GTATGCCTCC 
TCCGTAGGCA TCGTCCACGA TACGTCTCGC TCGGGCAAAA CCGTATACGT GGAACCGACG 
GAGCTCGTGG GACCAACCAA CGAATTGCGA CAAGCCGAAG GTGAACTGCG GGCCGAAGAA 
GCCCGTGTGT GGCGGTCCTT GACGGAGCAA ATATTGAAAA ATCAAATCGT GTTGGAAACC 
TCGGTTCGAG CGATCGGACA GCTGGATCTT GTCATGGCCC GACTCTTGCT GGGACGCAAA 
CTGTCCGGCA CCATTCCTGT TGTACAAGAC GAAGGAGTTA TTCAACTGCG TAACGCCAAG 
CATCCCGTAT TGTTACTGCG GCAAGTCAAG AATGTGGTCG GTAGTGACGT GGATCTGGGG 
GCCGACGGCA ACCAAGGTTT GGTGTTGACG GGGCCCAACT CGGGTGGAAA AACGGTGATT 
CTCAAACTGC TCGGTCTCAT GGCACTCATG TCTCGCGGTG GTATACCCGT GCCGGCCGAT 
CGGCCACGGG TCGCAGTCGG AGCCAAGTCC TACGGCGACG AGTACGATAG CAACAACGAC 
GAATTCCAAC CCCGCATTGA CTTTTTCAAT CCTGTCCTTG CCGATATTGG TGACATTCAA 
AGCGTCGGCG GCGACCTGTC AACCTTTTCC GGCCACATGC TCGTTTGCCG TGAAGTCCTG 
GCCAATTCGG GCCGCAACGC TCTGGTTCTC ATGGATGAGC TGGGGAGCGG CACAGATCCG 
GCTCAGGGTG TTGCGATTGC GCAGGCTTTG CTGGAAGCTA TTTTGGAGAC GGGCGCTCGC 
GTGGCCATTA CGACGCATTA TATGCAATTG AAGCAGCTGG CCGCGTCCGA CGACCGTTTT 
TCCGTCGCGG GGATGCAGTT TGTCCAGGGT CGGCCCACGT ACAAGCTGCT TCCCGGCACC 
GTGGGTGAAT CGTTCGCCTT GGCCGTCGCG GAACGCCTCA ACCTGCCCCA AAGTGTCATT 
GACCGAGCGG AGGCCTTGAT GGACTCAGAA ACCAGACAAT TGGGCGACTT GATTCGCGAA 
CTGGAAGACC AAAAGGGTTT GGTAGATCAG CAAGTGTTGG AGCTGGAGGA GAAACGCCAA 
GAAATCGGCA AGATGCGGTT TGAACTGAAG GAACAAGGAC TCCGACTCGA AAAGAAGCAG 
CTTACGGTAC GGCGCGAAGA AGCACGCAAG TTTGCGAAAA AGCTGGAAGA AAAGGAACAA 
GTATTGGAAA ATGTTCTAGA GAAACTCAAA GCGGATCCCA CCCGTCGGGT CTTGGCCAAG 
AGCTGGGACG ATATCAAGTT CGTCAAACGA GACGCCTTGA ACGAAGCTGA GAATATTCCC 
AGCATCGTTG CACGTAAAAA GAAAGCCAAC GCCGTGCTCG CAGCGGAACA AGGCGAGCTG 
ATTCCCATTG CGGAACTTCG CGAGCGCCCC GAGCTCAAGG AGGGTGACAA GGTAATTGTT 
TGCAAACAGG GTCCCGTCTT TGGCCGAGAA GCAACGATCG TTAAGTCTCT CGGTAGTCGA 
GTAGAAGTGT TGGTGAACAA TATGAATGTA GGCCTCAAAC TGACACAAGT CGCGCTGCCC 
ACCGCATCCT TTCGATCCAC CTCGGGTCCC GCAAACACAT GGGGCGACGG CCGCCTGTCC 
ATTGGCCGAG CGGCGGAACG AGCGCTGGCA ACGGAACGCT GTGCGGGACC ATCAACGTCA 
TCATCGTCGT CCTCCGATAC CGTTGCCGTG TCGGCTCCGT CTAAATCCCG AGGAGTCACG 
ATGCGCACCA CATCCAACAC TGTCGACGTG CGCGGTTGCA ATTTGGAAGA AGCCAAGGAC 
CGCATCCGGT CCGCGTTCAG CGCGAGCTTA CTGGCGGGCC GATCCGTGGT TTACGTACTG 
CACGGCCACG GAACGGGTGG GGTTTTAAAA AGCAAACTGC GGCAGTGGTT GCCCAAGGAG 
AAGACACTGG TGGATTCCTT CCAAGGAGCC GATGCGGCGG ACGGTGGCGA CGCCTTTACC 
CGCGTGCAGT TGCGGTAGTC CGTGCATAGC GCCGCCAGCT GGGACTATCT CGCCGTCCAT 
GAACCGCTTG GTCGACACTC TGCTAGGCAA CGACTAACAC GAGTTGAAGT TTGTGGTGAT 
TGATATAGTT ATTCTGCGCA CAGAAAGCAT TGTTGGTCCC GGAACGGGCC CGACGGCTGG 
TACAGGAGCG CCTCGAGCAG CACGGTGTGG CAGGCACCAT CCGTTGTCGC CATGGGTGCG 
GTATCGCGAC CAACCGACAA ACTGGCTTAC TGTAAATCAT GGAAATATGC AGAGC 

 

Protein sequence

MGISSKTILA MLGASLGWTT ALVVDVPHRP WSTSSRTRST SAIGNGNGDM DYDSSARAGA 
DGYSVLRQPA SRSNWDPNLD PEFEVPLSLD QAQSSFQTQD DYWWNNEVQK AKPKQSIQRS 
SSVTASSVTT ASDREPANNA IAKPEDLDLF QRSLDTLDYP RVLQALEEQC TTVPARLMVR 
QASHDLTTNG TSTIQSKKSK RIPKGSERAF QPLTADTVLG TQERYRAVQE LEWILQGGSG 
QINLADYSYR NRKSYKETLA GKPPPLGGNA FDLLAILAVA EQGKVLEGEE IFDVSQMLDR 
MQDVRLWSDD GLLNVNRLQQ DIEFVELPKL ASCIQVNTTL QDLLHNAFDK DDRLSGTTFP 
VLGRLRARVR SLKADIMGTL DSLLALPSIK NKLALESGGP IYSEVNGGRL VLPVAQKYAS 
SVGIVHDTSR SGKTVYVEPT ELVGPTNELR QAEGELRAEE ARVWRSLTEQ ILKNQIVLET 
SVRAIGQLDL VMARLLLGRK LSGTIPVVQD EGVIQLRNAK HPVLLLRQVK NVVGSDVDLG 
ADGNQGLVLT GPNSGGKTVI LKLLGLMALM SRGGIPVPAD RPRVAVGAKS YGDEYDSNND 
EFQPRIDFFN PVLADIGDIQ SVGGDLSTFS GHMLVCREVL ANSGRNALVL MDELGSGTDP 
AQGVAIAQAL LEAILETGAR VAITTHYMQL KQLAASDDRF SVAGMQFVQG RPTYKLLPGT 
VGESFALAVA ERLNLPQSVI DRAEALMDSE TRQLGDLIRE LEDQKGLVDQ QVLELEEKRQ 
EIGKMRFELK EQGLRLEKKQ LTVRREEARK FAKKLEEKEQ VLENVLEKLK ADPTRRVLAK 
SWDDIKFVKR DALNEAENIP SIVARKKKAN AVLAAEQGEL IPIAELRERP ELKEGDKVIV 
CKQGPVFGRE ATIVKSLGSR VEVLVNNMNV GLKLTQVALP TASFRSTSGP ANTWGDGRLS 
IGRAAERALA TERCAGPSTS SSSSSDTVAV SAPSKSRGVT MRTTSNTVDV RGCNLEEAKD 
RIRSAFSASL LAGRSVVYVL HGHGTGGVLK SKLRQWLPKE KTLVDSFQGA DAADGGDAFT 
RVQLR