Gene PHATRDRAFT_47726 details

Gene Information

• Locus tag: PHATRDRAFT_47726
• ID: 7202905
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 652068
• End bp: 654205
• Gene Length: 2138 bp
• Protein Length: 571 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002181947
• Protein GI: 219123262

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.347863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TAAAATCCAT CTTTCCTTTG AGCGACTGTG ACGACCTGTG GAGGGAGAGT GATTTTTGTC 
ACTGTGAAGT TGTCGGTACT CCGGCACTCG GCAGGTAAAA TACTCGCGGT GGGTGCTTTG 
GTGCGTTCGG TGTAGGACGC ATCCTTCACT GTCACTGGGG GTATCGGCAA GAACCATACA 
CCGTAGAGAG AGCGAGACGA AAAGGACACA CCGTAGCGTA GAACAGTCGG ACGAAACGTA 
ACTCAGAAGA GTCGGTATTG GTACACACTC ACCATTGTTG GGAATTATGA GTGCGACGAC 
TCCGCCAGTC GCTTCTTCGA AAGTGGACCT GTTCGAGTAC ACAGAAGAGC AACTATTGGA 
AGAAAAGGTA CTCACACACT ACGAGATTCT CGGTATATCG ACCTTTTGTT CGCAAGATGG 
TACGTTTTAC CGAATCACAC TTTGGATTGG CGTCACGCTC GGCGTACCTC TGAAGGATTT 
ACTGGTCGTT CGCCTCGTCT CACCTCTTCC GTACCAACCC CGTGCTAACC TTCTTGATTC 
CAATCGCCGC GACAGATGTC AAAAAGGCCT TTCGGCGCTC TTCACTCAAG TACCATCCCG 
ACAAGCACGG CCACGATAAG GACTACGCAT TCCTGGCGCT CAAGCAGGCC CACGATACGC 
TCTACGATCA CGAAAAACGC CAAGCCTACG ACTCCACAAC CTTACCCTTT GACGACGCCA 
TCCCCCCACC GCGGGATAAG CTCCTGCAGG ACGATCTACT CCTCTACAAG GACAACGACT 
TTTACGAGCT CTATCGACCC GTCTTTGAAC GCAATCTGCG GTTCGACGCA AACTTGCGAC 
CGGACGCCGT CGGCAACGCC AAGAACGGGA ATCACAACGG CAAGAAGAAA AAAGCCGGCA 
AGGCCAAGGC GCCCCCGACT TTGGGCGACG CCGACACCCC CATTGCCCAA GTACACGCCT 
TTTACGAATA CTGGATTCAT TTCGAATCGT GGCGCGATTT TTCGGCCCAA GCCACGGACG 
AACTTCAGGT GGAGAACGAA CTGGAAAATG CCGAATCGCG CTTTGAAAAA CGCTGGATCC 
AGAAAGAAAT CGATAAGCGC GCCAAGCAGC TGAAAAAGAC AGAAATGAGT CGGATTCAAT 
TGCTGGTGGA ACGGGCGATG GAAGCCGATC CGCGATTGCG GAAGTTTCGA CAGGAACAGT 
TGGCCGCCAA GGAACAGGCC AAGCGCGAGC GACAGGAAAA GGCGGAACAA CAAAAGATAC 
AAGCGCAATT AGAGCATGAA CGGCAACAAC AACAAGAAGT AGTGGACCGG CAGCGGCGAG 
CGGAAGAAAA GGTGACGCGC GAACAACAAA AGAAACATAT ACGGAAAGCG CGACAGAGTC 
TGCGAAAAAT GGCGTCGGCC TCTTTTGAAT CTCTCGAATC GGAACAGAAA TCGTCCATTG 
TATGGGCGGA TACTTACGAC ATGAATCTGG ATGTCGAAGT GCTGTGTACA AATTTGGATT 
TGACGGGGTT GCAATCGTTG GCTCAAGAAT TGGAAAATAT CACTTGTCCG AAAGAATCGT 
TGACGATGAT TCACCAAGAA GTACTAGTGG CTAAGCAGCG GGAGACAGAC GGGGACTTTA 
GCAATGGCGA ACAATCGTCT CCATCTCACA ACGGAACTTT TTCGACGAAA GAAACGACAA 
CGTCGCCTGT TGTAACACCG GCGTTGAAGC CGAACCTCTG GACCAAGGAG GAATTGTCAG 
CCCTGGCTAA GGCAGTCAAG AAGTATCCAC CCGGTGGTTC CTCACGATGG GAACAGATTG 
CGTTGTTTGT GAATAATTTG TGCAAACAGG ACGAACCCCG ATCCAAGGAG GAATGTATCG 
AGAAATACAA CAACGTGGCG AAGACGCACA GCAAACCAAC CGAAAGCACG AACGGCGTCG 
CGGCAGCATC AGAACCCGAA AACTCTTCGC AATCCAACGA AGACGTGTGG ACGGCCGAAC 
AGGATCAGCA GCTGCAAGAT GGACTAGCTG CGAATCCAGC GAGCATGGAC AAAAATGAAC 
GGTGGACCGC AATTACAGAG TGTGTCCCGG GAAAATCCAA GAAGCAGTGC GTACAACGGT 
TCAAAGTGAT TCGGGATGCC TTGAAAAAGA AGAAATAG 

 

Protein sequence

MSATTPPVAS SKVDLFEYTE EQLLEEKVLT HYEILGISTF CSQDDVKKAF RRSSLKYHPD 
KHGHDKDYAF LALKQAHDTL YDHEKRQAYD STTLPFDDAI PPPRDKLLQD DLLLYKDNDF 
YELYRPVFER NLRFDANLRP DAVGNAKNGN HNGKKKKAGK AKAPPTLGDA DTPIAQVHAF 
YEYWIHFESW RDFSAQATDE LQVENELENA ESRFEKRWIQ KEIDKRAKQL KKTEMSRIQL 
LVERAMEADP RLRKFRQEQL AAKEQAKRER QEKAEQQKIQ AQLEHERQQQ QEVVDRQRRA 
EEKVTREQQK KHIRKARQSL RKMASASFES LESEQKSSIV WADTYDMNLD VEVLCTNLDL 
TGLQSLAQEL ENITCPKESL TMIHQEVLVA KQRETDGDFS NGEQSSPSHN GTFSTKETTT 
SPVVTPALKP NLWTKEELSA LAKAVKKYPP GGSSRWEQIA LFVNNLCKQD EPRSKEECIE 
KYNNVAKTHS KPTESTNGVA AASEPENSSQ SNEDVWTAEQ DQQLQDGLAA NPASMDKNER 
WTAITECVPG KSKKQCVQRF KVIRDALKKK K