Gene PHATRDRAFT_47725 details

Gene Information

• Locus tag: PHATRDRAFT_47725
• ID: 7202718
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 645010
• End bp: 648587
• Gene Length: 3578 bp
• Protein Length: 1097 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002182107
• Protein GI: 219123593

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCGCC TGCGAGTTCA GTCTTCCGCA TTGAAACCAG TTTCACGCCG TCAGCAGAAA 
CATGCAGATG TGCCGTCGTC CAAGTCAGAG ACATACCCAA AGCTTAGAAA AGTAACTCGG 
CGCGATGAAG ACCCAACACC GACTTCTTCA TCCACAGCCT CCAATCTACC TAACGCAGAC 
AGAAAAAGAT GTGTTTTTGG TAGAGCAGCG AATGGTAGTC ATCCCGTGAG AAGTGGGAAA 
GCTCCGACGA TAGACGGCAA TCTAATAAAG CCGACCTTGC TCAAAATCGA AACGAATTCT 
GACAAGAACG TCTCGAATTT CGACAAAACA AGCAACTCTG CATCGTGGAT CAAACAGTCT 
CTTCGAAAAC CTGACAAGTT TGAAAATGCC AGAAAATTTA CTCCAACTAT CAAAAAGGGA 
TCGGAAACCT CCGACGTTCT GCAGAATATT CGATTTGGCC ATGGTGAAAA TGATGGAAGC 
CTGGAGTTGT CAGGCAAAGG CGTCAACGAA ACTTTAGTTG ATCAGTTGTG CACAAATTTA 
AAGAATATCA GACACATAAC TTTGTTGAAC AACAACCTTT CAGAAAAGGC GCAAATGAAA 
CTGATTACGG CAGTTATTGA TGCGAACACG ATCGCGACTC TGGTTTTGGA CGGCATCGAG 
ATTTCTGAAA AAAACTGTGA TTGCATTGGC AATATCTTCA AAGCGAATCG AACGTTGACG 
ACATTTTCTG TTCCACTAGC AAAGCTGCCC TCGAAATTGG AGTCGCGGCT GAAACGCAAT 
CGCAAAATTG AGTCCTACGT GAAGACCATC CGTCAAGCTG GCGGAATGGT ACAAAGTCGT 
GCCATAACTC CGCGTGACAA CGAACTCGTG GTCAATATTG TCAAGATCAT CGGAAATGAC 
CCATCCATTA CTGAGTTTGT GGTTGACGGC GACGTCAGGT TCCAGCATCT TGGCAGTTCG 
ATGATACTGG ACCTGGCAGA ATCGCTCCGG TCAAACTATT GTCTCAAGAC CTTGCGCGTC 
ACAAACGTAG AGCTTGGCAA TGCATTTCTG TCGGCTTTGG CTACGAGTAT AACAACAAAT 
TTTACTTTAG AAGAAATCGA CCTCTCCGGG AATGCGATAA CGAGCGAAGC TGTGGTAGCC 
TTTTGCCAAG CCATGCCTCT GAATACCACA CTTATCAGAG TCGACTTGAG CAGAATGCAC 
ACTCCAATCT TGTCGGATGA TGAAGGAGTT GTCTTAAAGG CGCTCAAAAA GAATGAATCG 
GTGCGACAAT TTCAGATCAA GTTCCGAAAC GGGTACAGCA AAATTGCTCT TGAAAAAATC 
CTCGCCAGAA ACAAATCAGC AAAGTGCACA CCAGCAGTTA CTTCTTTTGA TACCAAGCTA 
CTAGCATATC TGAAGGCTGA AGCTGAGCAG GCTGAAACGA TTCTTTCGGA GCGACAACAG 
ACAGAAACGG ATGGAAGTGA GCAGTTGGTC GAGGATTGGG CTCATCTTTA CGAGCTTTCG 
AAAATGGCAG ACATCTTCAA TTCGTTCGAC AACGCGTATG AAGAATGCGG CGAAACTACA 
GAACAACCGA CGACAACCAA AAAGAAGAGT GGGAAGATAT CCTTAGTCGA CGTGATAGGT 
TCAATGGAAT CCATGTCCGC CGACGGTTCC TTTCTAACAG AGGCATTCAT CTCGAAATAC 
ATGGTTGAAA ACAAGGAAAC GGGTGGGCTT GTATTTGAGT TCACGAATCA ATTCCAGATG 
TTTAAGAGGT TTCAAATTGG AGACAAAGCG CGTGGCTTTA TTACCAAGAG ATTTGTGGAC 
GTGCTGTTGG CTCACCCGCG TACCAAGGAG ATCACTCATT TGAATATGGC CAACATCAAT 
TGTAGCGACG ATTTATTGGA GTGGCTTTCC AAGAGATGCA AAACGGAAGC GACACTTTTG 
CCAAAGCTCC ACATGCTCAA CCTAGAGACG AACAACATTT CCGGGTCGGG AGTTGTCGCC 
CTTGCCGAGA CTTTGAAGAC TTCAAAGACT TGGAGATTCT TGCAAGCAAT AAAGCTCGAA 
AACCAAAGTT CCTTGATGAA AACAGAAGCT GAAGCTGCGC TGGCCAAGGC AATGTTTGTA 
AATTGCAGCG TTATTCGTTT GGGCCTTCGG CTGCGGAATC TGCTGGAGCG CGACCGAATT 
GGTAGATATC TTCAACGAAA CATGGACTAT CTGCGTCGGG CCAGGCGAGA ACACGCAGCG 
AAGACGGGTA AGATTATAAA GCGATCCAGA AACACGATGG AACGTTTCAT TGACAGTATT 
GCGGCTAACG ACTCCGCAAT TGACCACGTT GAAATTGTTG GTGATCCCTT GTTCCTTGGA 
CTCAATCGGA ATGAGGTCTT GAATGCAGCC AAATGCTTTG CAAGCAACAC TTTCGTTATG 
AGAGTGAAGC TTTGTAACTT AAAGCTCGAT GACAAATACG CTGAGGAACT GGCAAAGTCG 
CTTGAGCAAT CACGGATCGA GTACTTATGT TTGGACAGTA ATGCCATCGG GGGGAATGGA 
ATCAAAGCCA TTGTTGCCAG TCTCGCTAAA AATCGATCCG TTGTCGAGCT CCAAATTCGT 
CACCAAACGA AGAATATGGC CGCCGCAGAT GAAGAAGTCA TTGCTGACTT ACTTGATAGC 
AACGAATCTT TAGTCAAAAT GGGTATAGAC TTTCGCAGCC ACAGCGCCCG CACTAAATTG 
GAACGCAAAC TCGCCAACAA CAATGCAATT CAGCGCAAAG CCCGTACTAC GGATAAGCAA 
GACAGCAAAA TGACCAGTAG TATCAGCAAG ATCAAGTCAG TTGAGGTTCA GAAACTTTTT 
GATTCCGTCA AGGACGGAAA TCCATCAATT ACGGAAATTG AGCTCAATAA CAGTGCCGAG 
TTCTTACAAA TGGAAAAACG TTCGAGACAA AACTTTTACG AATCCTTGCG TGAGAACAAA 
ACGGTCAAGT CCTTGAGCCT TTGCAATTTG CAACTCGATA ATACCTTTGC CGACGAATTG 
GCAATCATCC TGTCAGTGAA CGAAACCATC AGGACCATCG TACTGAACGA TAATGAATTT 
ACGTCGGCCG GCATTTTGAC GATTGCCTTG GCGGCCGCCA AACGAAGGAA CGTTCGCCAG 
CTATCCATTC GGAATCCTCG CTTCAAGTTA ATCAACGAGC ACGCCGAAGA GTTGCTACTC 
GTTATGGAGC GGAAATCTAA CTTCGAAACA TTTGATATTC AGTTGCGAGA GGAAACGCAC 
AAACAGCGCT TGTTCAAGAT TCTCGCTAAG AATAGTAGAT GTACGGACGT ATAAGGAAAT 
CGATGTTTTG CACAAGGACA TACTTGCTGC CTACGCTTTT CCCGTACGGA AAACGAGTGG 
ACTTGCTGCC GGGTAGGGAT CCGCCCGGGA TCCAAGAGCT GTGCGTTTCC ACAACATGTG 
TGCGACGATT TGACGACTGA TCCGACTGTC CGGGTGGCAA ACGAATATTG GAATGTTCGC 
GAACAAACGC CGTCGTTGAG ATTGTGTGTT TCCTTGACCT ATGGACGATG AGGTGTCTTC 
GTTGAATAAG GCCTCTCCGT CGCCATCCGG TATCATAG 

 

Protein sequence

MERLRVQSSA LKPVSRRQQK HADVPSSKSE TYPKLRKVTR RDEDPTPTSS STASNLPNAD 
RKRCVFGRAA NGSHPVRSGK APTIDGNLIK PTLLKIETNS DKNVSNFDKT SNSASWIKQS 
LRKPDKFENA RKFTPTIKKG SETSDVLQNI RFGHGENDGS LELSGKGVNE TLVDQLCTNL 
KNIRHITLLN NNLSEKAQMK LITAVIDANT IATLVLDGIE ISEKNCDCIG NIFKANRTLT 
TFSVPLAKLP SKLESRLKRN RKIESYVKTI RQAGGMVQSR AITPRDNELV VNIVKIIGND 
PSITEFVVDG DVRFQHLGSS MILDLAESLR SNYCLKTLRV TNVELGNAFL SALATSITTN 
FTLEEIDLSG NAITSEAVVA FCQAMPLNTT LIRVDLSRMH TPILSDDEGV VLKALKKNES 
VRQFQIKFRN GYSKIALEKI LARNKSAKCT PAVTSFDTKL LAYLKAEAEQ AETILSERQQ 
TETDGSEQLV EDWAHLYELS KMADIFNSFD NAYEECGETT EQPTTTKKKS GKISLVDVIG 
SMESMSADGS FLTEAFISKY MVENKETGGL VFEFTNQFQM FKRFQIGDKA RGFITKRFVD 
VLLAHPRTKE ITHLNMANIN CSDDLLEWLS KRCKTEATLL PKLHMLNLET NNISGSGVVA 
LAETLKTSKT WRFLQAIKLE NQSSLMKTEA EAALAKAMFV NCSVIRLGLR LRNLLERDRI 
GRYLQRNMDY LRRARREHAA KTGKIIKRSR NTMERFIDSI AANDSAIDHV EIVGDPLFLG 
LNRNEVLNAA KCFASNTFVM RVKLCNLKLD DKYAEELAKS LEQSRIEYLC LDSNAIGGNG 
IKAIVASLAK NRSVVELQIR HQTKNMAAAD EEVIADLLDS NESLVKMGID FRSHSARTKL 
ERKLANNNAI QRKARTTDKQ DSKMTSSISK IKSVEVQKLF DSVKDGNPSI TEIELNNSAE 
FLQMEKRSRQ NFYESLRENK TVKSLSLCNL QLDNTFADEL AIILSVNETI RTIVLNDNEF 
TSAGILTIAL AAAKRRNVRQ LSIRNPRFKL INEHAEELLL VMERKSNFET FDIQLREETH 
KQRLFKILAK NSRCTDV