Gene PHATRDRAFT_47713 details

Gene Information

• Locus tag: PHATRDRAFT_47713
• ID: 7202712
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 613595
• End bp: 615791
• Gene Length: 2197 bp
• Protein Length: 615 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002182100
• Protein GI: 219123579

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACACGCTAT GCGAAGCCAA CTGGCAGTGC TATAGGGAGA CAGGAATACG ACCAGGAAAT 
TGTTCGTTGC CTGCGGCGAC CGGGAACACG GGAATCGTCC CCAACGAATT CAAAGTTATC 
CGAGAGGACG GTGGGTCATT GACTCGAACT ACCAATCCAA CTCGACGAGG CGGCCAAGCG 
TTCGTTGGCA ATATAGTCTT CGGCATTGAC TGTAGAAGAC CGGTGCGGCT TCCAGTTCTA 
CTGATTCCGG CGCAGTCCAG CAATGAGAAA GCTCGAAAGA GCCACATCTT ATCGTAGTAT 
CAAACCTTTT CTGCAGTCCT TTGCCACCGC AGCATGAAAG CAATGCATAT CATTTCGGCT 
ACTGCTTCTG CGTCGACTAC ATATCCCAAT CCTGCGGATC AACGACGTTC CTATCAGCAA 
CAGCAGCAAT CTCCGACCGA AGCGATCGAC GACTTTGCTC AGCATGTTCT GACTCGACGA 
GCAGCGGGCG ATGTGTCTGT AGATAGCAGT TTGGGATCGT ACGTCACCTC GCTGCTCCGT 
TGCGCGTCGG AAACTGACTT GACGGACATT ACGAGAATGG ACGAGTACGA AGGACTCGTC 
GAGTTGTTGC AGGAGCACTG CAGTATGGAT ACACCACAGG CGCGGGACGC TTTGGAGGAG 
ATTGCACGGG CGGTACGATC AGGATCTGTT CCCAAGAAAC GAGGGTTCCT GTCCCCGGGT 
GGCTTGTACG CTAGTGGCGG GTTCCATTCG ATGCACACCA TGGGATCGGC GTTGCCCGAC 
GTAGCCGGCG CCGACGGTCC GGAATCGACG ACGGATTTCG ACGAATTCCC TCCTCTAGGG 
AAAACAGCAA CCGTTGCATC GCCGATTCAT GCAGATAATT TGATTCCAAT CGATCTTTTG 
GGGGAGCTTG ACGACCCCGA TGATGGAAAC GTACCGGATG CTTCCGAATC CGATAGAATC 
CGCCAGGAAA ACTTTCCTCC CCTGGCCCCC ACAGAACCAC CACCGTCGCA CAAGAAGGGG 
AAGCAAGGTA CGAAAAAAGG AAAACACAAA TCCTCGAATC TAACAGCGGA CTTTTTTCGA 
GCGACCTCAC GTTCCAGACA GAGCAGCATT GATGAGACTG CGTCACACCA CACCACGACC 
CCTCCCATGT ATCCGCAGCA GCATCACTAT TCTCCCACAC TCTCGGCATC GTCACCACCG 
CTGTCGTCGA CAATAGCAAT TCATGGAAAC GAATCTGCGC AATATTACAC ACACCAGCAG 
TGGCTGTCCG CAACGGAGAT TCTCTTATCC ATGAACCCCG AAGTGGACGA AGAAGCAGCG 
GGCGCCGCAG CGACCTTGGC CCATGCCGAC GTCAACGTGG CGCAGTACGT AGTTGAACAG 
GCCCTCACTG CACCGCCGGT GTGTCGACAT TTGCTACAGG ACGGCTGTTA TCGAGCCGAC 
TGTACGTTTT CGCACGACAT TGAAGGGCAC ACGTGTGTAT TTTGGTTACG CGGTCGATGC 
GGCAAAGGCG ATTCGTGTCG CTTCAAGCAC GGTTTTGACG AGAAAGTACT CGATCGTTTG 
GCAGAATGGT CGCACACTCA GTACGACAGT GCGTACCACC AAAACTTCTC TGTCGCGGAA 
GAATACCCGG AGATGTCCTC CTCCGGATGG CAAGAACGCG CGACTCCTGA GCAATCAACA 
GCTTCTTCGT TTGCCAACAT CGCCTCCCAG GGGTACCGAC CTTCGGCATT CGCACAACAG 
ACAACAGGTG GTGCCCTGAC CAGTGGGATA GCCGAGCTTT CACCCGTACA GTACCAGCAG 
CTAGCGACGG TTCGAATTCC GCAAGACTTG TGGAATCCGC ACGAAAACCG TGATTCTGCC 
GTCTTTTTCC TTCCCGATCC GATGGAGCGA TATCGGAAAG TGTCCGCCAC GACTCGCCGT 
GAAGATGTAA TAGATTTGCA TTTCCAATCC ACGAAAACAT TTCCGATTGT TTTGGAAACA 
GTGCTACCGA ATACGCTTCA GCGTTACGGC GAAGTATGGG TCGTGACGGG CACCGGACAC 
CATGTAGGGA TGAAAACGCA TCAGAGAGGC GGCGGTGCAT TGGAGAAGGC TGTCACAGAC 
TGGCTCGTGG AAGAGGGCTA TAAGATAGCA CGTGGAAAAG ATCGGAACGG AGAAGGAGGA 
GCTGTACTTG TAAAACAATA GAGAACTGTT GACCTCT 

 

Protein sequence

MKAMHIISAT ASASTTYPNP ADQRRSYQQQ QQSPTEAIDD FAQHVLTRRA AGDVSVDSSL 
GSYVTSLLRC ASETDLTDIT RMDEYEGLVE LLQEHCSMDT PQARDALEEI ARAVRSGSVP 
KKRGFLSPGG LYASGGFHSM HTMGSALPDV AGADGPESTT DFDEFPPLGK TATVASPIHA 
DNLIPIDLLG ELDDPDDGNV PDASESDRIR QENFPPLAPT EPPPSHKKGK QGTKKGKHKS 
SNLTADFFRA TSRSRQSSID ETASHHTTTP PMYPQQHHYS PTLSASSPPL SSTIAIHGNE 
SAQYYTHQQW LSATEILLSM NPEVDEEAAG AAATLAHADV NVAQYVVEQA LTAPPVCRHL 
LQDGCYRADC TFSHDIEGHT CVFWLRGRCG KGDSCRFKHG FDEKVLDRLA EWSHTQYDSA 
YHQNFSVAEE YPEMSSSGWQ ERATPEQSTA SSFANIASQG YRPSAFAQQT TGGALTSGIA 
ELSPVQYQQL ATVRIPQDLW NPHENRDSAV FFLPDPMERY RKVSATTRRE DVIDLHFQST 
KTFPIVLETV LPNTLQRYGE VWVVTGTGHH VGMKTHQRGG GALEKAVTDW LVEEGYKIAR 
GKDRNGEGGA VLVKQ