| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47709 |
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| Symbol | |
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| ID | 7202891 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | - |
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| Start bp | 595389 |
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| End bp | 599300 |
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| Gene Length | 3912 bp |
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| Protein Length | 1196 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182096 |
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| Protein GI | 219123571 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAACCAGCTG CTTACGAACT ACTGAATTTC ATAGCCAAAG GTGTTCGTAC CAGGATGACC
CCAACAAAAA AATCCTGCGG GTCCCACAAA GTAACAACTC TTCGTCGGAC AATTCGAGAC
AGAGCCAACA AAGATGGACA CCAGTAGCTT TAGTGACCCC CTCGACGACG ATTCGATTTC
TGTAGACTAC TCTTCGACAG GAACTAACAC CGAAAGCGAC CGTCATGCCA AGTCTGACGA
ACGCGACGAA ACCAAGGAAG TGCAAAGGTT GGCTTCTTCA GAGACGGCTC ATATTCGTTT
CTGGCGACTT GTGGTTGTGG CTCTACTGCT CATATCAGGA ACAGTGCTTT CTACGTTCAC
ATACATTTTC TTAAAGGGTC AAGAGAAAGA CGATTATGGA GATGCGGTAA GATCTATCGG
TAGCAGCTGT TGACAGTCCA CTCAAACTTC CTGTTGGTCT CACCATGCTT TCCTATTGCT
GTCAATCAAA GTACTACCTC TTTGTGAACT CTGTTCGTGA CATCACCCAA TTTCGAGTAG
TAAATATGTT TGATGCTATC CAAGGATTAG GAGAAACACT CACAGCGCAT GCCGTCAATC
GGAACTTGAC ATTTCCGTTT GTCACTTTAC CCATGTTCGA AGTCGCCGGA CAACACGCGC
GAACTCAGTC GCGGAATGAG CTTCTTTCCT TTGCGCCTTT TGTCGGGGGA GACGAAAAAG
AAGCATGGGA GCGATATGCA TTGGAGAACC AGGGATGGAT TGAACAGGGC CGTGAGATTA
GGCTGGAGAG CGATCAAAAT GCTCAGGTAA CGTCGTTCGT TGAAGGGTCT ATTCCTACCA
ATATAGTCGA GTTTACAGCA TCTGGAGACG TAGGGCTAGC TCCTCCAGGA CGTGATTCCT
ATTCGCCCGT TTGGCAGATG TCTCCTGTCC CATTCTCAAC CGTGTCCTTG AATTTTAACC
TACAAACATT TGCTCCCGCC AAGCTCGTGA TGGACGCTGT GGAAATCTTG AAAGGTACGT
TGAGACTCAA ACAGCAGCTT TCGTCGATTT TTTTGTGATC GTCTCACACC TCCCCACCCG
AACCCGCGCC ATAGATTCTG TTCTAAGCGT GGTAGCGAAC AATTCACAAA ACTCGAGATT
GGTGTTGACC GAAAAGGACC ACACTGCTTT CCACGAACAG TTTGTTACTA GTAAAGGCGA
TGGCAGCCTT CAAGTACAAC CCCACGCATC CATGTTCACT CCAGTATACG AGGAACTAGG
GAACCGTGAT TCAAAAATTG TTGGGGTCAT TTCCAGCGTA ATCGCTTTTG ATGCATTCAT
GGCTGACCTG CTACCCGATA AAGTGAGGGG TATATACTCA GTCATGAAAA ATACATGTGG
ACAACAGTGA GTGCCGAAAG TACAATATTT GCTGCATTTA TCATTTGTCC GCAATTGTTT
GTGTGCTTAC ACAGTGCGTA TGACAGATTC TCGTACGAGC TGACGGGTAA TCGCGCAATA
TATCTTGGCA ATGGTGATCA GCATGAAACC GCCTTCAACA AATACGAAGT TGTGATTCCC
TTCGATGCCT ATCGCGATCC CGATCTTGCC GCCATCACGG AGAAGCATTG TCGGTATTCC
CTACACATGT ATCCCAGCCA GCAATTCGCT CAGGGATACG AGTCCAACCT TCCCATTGTT
TTCACGTCGC TCGTAGCAGC CACCTTTTTT CTTATGGCCT TGACATTTCT GGTTTACGAC
CGCTTTGTCT ACCGCCGGAA CATCAAAGTG GTAGATGCTG CTGCTCGATC TAATGCCATA
GTGTCATCAT TATTTCCCTC CAACGTCCGT GAGCGTTTGT TCGAAGACGC AAAGGCAAGA
AGCGATGTCA ACCAGGCTGC TCACTCACGT CTCAAAACAT TTCTGCACGG CGGCGACATT
CCTGAAACCG CCATTAGTGA TGCGAACGAG ATTAACGGGA ATTTTTTCAA GAGCAAGCCT
ATTGCGGAGC TCTTCCCGCA AACAACTATC ATGTTTGGTG ACATCAGTGG TTTCACGGCA
TGGAGCTCCT CGCGAGAGCC CACACAGGTT TTCCAGCTCC TCGAGACTTT GTACCACTCC
TTTGACGAGA TTGCCAAGAA ACGCCGCGTC TTCAAGGTAG AGACGGTCGG CGACTGCTAT
GTTGCGGTTG CTGGACTACC TGACCCCCGC AAAGACCATG CAGTAGTAAT GGCGCGCTTT
GCCAAAGACT GCATGCACCG AATGCACTCA ATGACGAGAA AGCTGGAAGT CTCTCTGGGC
CCAGACACGA CAGATTTGTC TCTTCGCATC GGATTGCACA GTGGACCCGT GACTGCCGGC
GTGTTACGAG GGGAGCGGTC CCGCTTCCAG CTCTTTGGGG ACACTATGAA TACGGCCGCA
AGAATGGAAA GCAATGGCAT TCGCGGTCGC ATTCAAATCT CACAAGAGAC GGCCGATCTA
ATCGTAGCTG CTGGTAAGGC GCATTGGTTC GTTGCGCGCG AGGATACAAT CGTAGCTAAA
GGTAAAGGTG AGCTCAAGAC GTTTTGGCTT GCACTCGGAG ATGGGGGAAA GACAAAATCG
ACGACAGATA CAACGCACAG CAGTGATGAT GTTTCCTCGC CCAATCACAA TAGTTCCATG
ATTCTGGATG GGCTGATGGT GACGAGCGCC GAAAGCGATC AGCAAGTCAA CACCCTCATG
TCCAACAAGA CTTCGCGTCT GATCGACTGG AATGTGGATG TCCTGTCACG GTTGATCAAG
CAAATAATTG CGCAACGCAA GGCTTCCAGC TCGCCGACGA AGGACTCGAC CAAAAAGCAC
TTCTGTCCCG GCGACAACAG AGGAGCCGCG ACCACGGTGC TGGACGAAGT GACAGAGATT
TTGGCCCTTC CAGAGTTCGA CGCGGAGGCT GCCAGGCGTC AGCAGGATCC ACAGAATATT
GAGCTGAACG CGAACATTAC CACGCAACTC CAGCAGTATG TGTCCAACGT TTCTGCCATG
TACCAAAACA ACCCCTTTCA TAACTTTGAG CACGCATCGC ACGTGACAAT GTCGGTAGTG
AAGCTACTGT CCCGAATTGT GGCACCAGTG GACGTGGTTG TGTCGGACGG GAAGAACCAA
AAGCGCTCCA TCGCTTCCAA GCTGCATGAC CATACGTATG GCATCACATC GGATCCATTG
ACCCAGTTTG CGTGCGTCTT TTCGGCACTC ATCCACGACG TCGACCACAG TGGAGTTCCC
AATGTGCAGC TGGTAAAAGA GCACAGCAAA ATCGCCAAAT TCTATCAGGG GAGGAGTGTC
GCCGAGCAGA ATTCTGTAGA TCTGGCCTGG GAACTACTAC TGGACGAGAG TTTTGATGAC
CTGCGAGCCG CTATCTTCGC CACCGACGGG GAAAAAGCCC GGTTCCGACA GCTGGTGGTC
AACTCCGTCA TGGCTACTGA CATCATGGAC CCGGATTTCA AGGCCATCCG AAACGCTCGC
TGGGAGAAGG CCTTTACAAA GTGTCCCAAC CTGGAGGAAG ATGCGAAACA AGCGACGAAC
CGCAAGGCGA CGATTGTGAT CGAGCACATG ATTCAGGCCT CCGATGTCGC GCACACGATG
CAGCACTGGC ACATTTACCG CAAATGGAAC GAGCGTCTTT TCATGGAGAT GTACCAGGCC
TTTAAAAGCG GTCGAGCTGA AAAGAGCCCA GAAACGTTTT GGTACAAAGG CGAGCTCGGA
TTTTTCGATT TCTATATCAT TCCGCTGGCT ATGAAGTTGA AGGATTGCGG TGTGTTCGGA
GTGTCGAGTG ACGAGTACCT GAATTACGCT ACGCGCAACC GCAAGGAATG GGAAGATCGC
GGTCAGGAAG TGGTTCGTGA AATGATGGAA AAAATCGGAT TTGGTTCAAT GGATTCTGAA
ACTATGAAAT GA
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| Protein sequence | MDTSSFSDPL DDDSISVDYS STGTNTESDR HAKSDERDET KEVQRLASSE TAHIRFWRLV
VVALLLISGT VLSTFTYIFL KGQEKDDYGD AYYLFVNSVR DITQFRVVNM FDAIQGLGET
LTAHAVNRNL TFPFVTLPMF EVAGQHARTQ SRNELLSFAP FVGGDEKEAW ERYALENQGW
IEQGREIRLE SDQNAQVTSF VEGSIPTNIV EFTASGDVGL APPGRDSYSP VWQMSPVPFS
TVSLNFNLQT FAPAKLVMDA VEILKAFVDF FVIVSHLPTR TRAIDSVLSV VANNSQNSRL
VLTEKDHTAF HEQFVTSKGD GSLQVQPHAS MFTPVYEELG NRDSKIVGVI SSVIAFDAFM
ADLLPDKVRG IYSVMKNTCG QQFSYELTGN RAIYLGNGDQ HETAFNKYEV VIPFDAYRDP
DLAAITEKHC RYSLHMYPSQ QFAQGYESNL PIVFTSLVAA TFFLMALTFL VYDRFVYRRN
IKVVDAAARS NAIVSSLFPS NVRERLFEDA KARSDVNQAA HSRLKTFLHG GDIPETAISD
ANEINGNFFK SKPIAELFPQ TTIMFGDISG FTAWSSSREP TQVFQLLETL YHSFDEIAKK
RRVFKVETVG DCYVAVAGLP DPRKDHAVVM ARFAKDCMHR MHSMTRKLEV SLGPDTTDLS
LRIGLHSGPV TAGVLRGERS RFQLFGDTMN TAARMESNGI RGRIQISQET ADLIVAAGKA
HWFVAREDTI VAKGKGELKT FWLALGDGGK TKSTTDTTHS SDDVSSPNHN SSMILDGLMV
TSAESDQQVN TLMSNKTSRL IDWNVDVLSR LIKQIIAQRK ASSSPTKDST KKHFCPGDNR
GAATTVLDEV TEILALPEFD AEAARRQQDP QNIELNANIT TQLQQYVSNV SAMYQNNPFH
NFEHASHVTM SVVKLLSRIV APVDVVVSDG KNQKRSIASK LHDHTYGITS DPLTQFACVF
SALIHDVDHS GVPNVQLVKE HSKIAKFYQG RSVAEQNSVD LAWELLLDES FDDLRAAIFA
TDGEKARFRQ LVVNSVMATD IMDPDFKAIR NARWEKAFTK CPNLEEDAKQ ATNRKATIVI
EHMIQASDVA HTMQHWHIYR KWNERLFMEM YQAFKSGRAE KSPETFWYKG ELGFFDFYII
PLAMKLKDCG VFGVSSDEYL NYATRNRKEW EDRGQEVVRE MMEKIGFGSM DSETMK
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