Gene PHATRDRAFT_47698 details

Gene Information

• Locus tag: PHATRDRAFT_47698
• ID: 7202705
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 566491
• End bp: 569191
• Gene Length: 2701 bp
• Protein Length: 852 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181934
• Protein GI: 219123235

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.389088
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATC CGGAACGCAC CAAATCTCCT CTGCGACCTC ATTCTTGCAA AGCAGAGACG 
GGCGACCAAA CATCGCAAAT GCACTCTCTC CTAAGCTGGA TGCAGCGCAG TACAGAGTCA 
TCGACGCCCA CTACTGTCGC GAGTACGCCG GATTGCTCCG ACTCTACCCA ACAGCAGACG 
CCACCTTCTA TTTACGATCT GCAAGATCGT TACGTCACCA CCGGCTCTCT CGCAATACCG 
GAGCAAACGG AAGACTACGA TGATGACGAT GACGTCATGT TGGAGGAGCG CTTTGGCGGG 
CGCGATCTCG ATCGAGAGAT CTCTCCGGTT TGCCGCACCG GCCTGACGGT GCGGACGAGG 
TCTTTACCCG GTTCTCCGTC CGAAGTAGAC AACTCCTGGG AGTCGCGGGA AAGCTACGCT 
TCCTATCCCA TTGGACGTAA ACTGCGCTCG CGTCGCAAGA GCTCGACGCA GGGTATTGTC 
CTCAAGAATC GTCGCCGTAG ACGATCCAGC CGTGCTTCCC GAGACGATGA TGACAATTCG 
CTCACCACCT TGTCCTTTTC GGATGATCCA CCCTCTCCGA ACAACGATTC TTTGCCCCGA 
ACAATCCCCT ACCGCAGAAT GTCTTCCCGC CGCTATTCAC CCGCGCGCTC GCTGGGGGAG 
TCCACCACAT TTCGGAATTT TGTTTGGAAA TTGGGGCACC CACGAGGTCT CCTATGGCTC 
ATGTGCGTTA TTGGACTCGT CAGCATCAGC ATGACCTACA TGTCGACGCG GAATATGGCG 
GGCCGTCCAG GAGAAATTGG AAGGATTCAA GTGCTTTACG CTGGAAACCA CCATGTCCCC 
CTGAGGACGT CGCGGCTGAA AGGAGGTGGT GTATCGGGAA ATTTCTTGCG TGGTTTTCCA 
GCGCCAACAT CTACGTCAAT CGCCGCCAGG AAATCTGTGC CGGAACAGGG ACGGAAGTCG 
GCGGTCACTT TGAATCATGC CATTGTGGAC TCCCGCAAAA TCTCAGAAGT AGGAGTTGAT 
GAACACCTGG CGAAAAACTA TGCTTTGAAG AAAAATGATG ACCGCAAGCA CCTTGAAGTG 
CATAAATCGA AACATGACGA AGGCAAACAT CACCACAGCC ATGACGAACA CAAGCATTCT 
GGGAATATGA AGGACAAGCA TCACATTGAG CACAAGAGTA CGGATAAGAA TGATGATCGC 
AAAGATCCGG CAAATCCAGA AATACAGCAT GAAAAACGCC ATGACAGCAG TGCTACGAAC 
ACTGAACTGG AAAATCACAA TGAGCCGAAA AACTCGCTTA CGTCCGTAGC AATGCCGTTG 
GTTCCTCTCA GCATTCCGAA ATCCGACTAC GAGGCTCAAG ATTGGAGATT GTACAGGGCA 
CCTGCCCACA GTCCCTCAAA CGTTACGCAC CACAGGATGG TATTTGTTGA TCCATCGTTG 
GCTCACGCCC CTCTTCGTCA CCGTAAGGTT GTGTCGTACC CATCCGATTA TACCGACCCG 
ACTCAGCTAT ACTCCATCCT GGATTCTGGC GACGAACGCA TCAAGCGCAT GGAACCCCGG 
GATCCATACG TGCAGGGCGA ATGTGTGCCA ATGCAGCCCT GGCAAACAAC ATACCACCCC 
TTATGCAACG GCGTACACGA GCTGGGTATC GATCAAATTC TCGGCGAAGA GACCGGTAGT 
GATATGCGTC TGTTTGGAAC AAAAGGATTT TGGCGTAACG CGTGGAGAGC GGATATTTTG 
AATGGACATT CGCATTTGCA CGAACGAGAT ACTATTGTTA TCAAAACTCT CAAGTATGTA 
TGCCCAGGAA TAAATTGCTT GATTGTTACT TACTGGATAT TTTACTAACT CCTCGATTTG 
TCTTCAGGCT ACAACATAAC TTTGAAGAAG CGCATTTTGA GCATGATCGT ATTGATGCGG 
TCGCGATGGA GCGCTTAACA TCGTCGCCGC ATGTTATTAA TGTGTTTGGA TTCTGTGGAC 
ATACGGTCAT GACTGAATTC GCTGACGGAA AGCGTCTTGG AGAATTGGCC GATCGAGCCA 
AGAAACAACC GTTGGAACGG CTCAAGATCG CTCGCGACAT TGCTGAGGGT CTTGCTGATG 
TACACGGCAT TGATGGAGAT GGCAATGTAT CTTTTGTTCA CTTGGATATC AACCCTGCTA 
ACGTGGTCAG CATAGGAGGC CGTCTGAAGT TGAACGATTT CAATATTGGT GTTCCAAGGC 
GCTGGAATAC TACGTCAAAT GAACCTTGCG GTTTCCCAAC ACAATATCCG AACGCGCAAT 
GGCGGTCACC GGAGGAGGCT CGCCAAGAGG AAAATCTGAC AGAAAAAGTT GATATCTTCT 
CCCTGGGTCA CATATTTTTT AGAATGATTT GCGGTCATGA GCCCTGGAGT TCATTTGAGC 
CGGGTGGCAA GCCCTCCGCC GACGAACTAC ATGAGAAGGT TGGAAGAGGT GTTTTACCCA 
CAATTCCTAC GAATGTTTTG GAGTCGAAAG ACCCCGAAGT TGTCGCCATT CGAAACGCGA 
TGATCCAATG TTACACTTTC ATTCCGTCCG AGCGTCCAAG TGCGAAACAA ATTGCCCGAA 
ATTTGCAGAA AGCTCTGGAC AAGGCCGAAC TAGTACAAGA GGCTCGGCCT TAAATCGAGA 
CAAAAGTGCG TGATATCTTG GCCATCAAGT AAACGGTTAA TAGACAGACT TTTCCTATGT 
G 

 

Protein sequence

MPDPERTKSP LRPHSCKAET GDQTSQMHSL LSWMQRSTES STPTTVASTP DCSDSTQQQT 
PPSIYDLQDR YVTTGSLAIP EQTEDYDDDD DVMLEERFGG RDLDREISPV CRTGLTVRTR 
SLPGSPSEVD NSWESRESYA SYPIGRKLRS RRKSSTQGIV LKNRRRRRSS RASRDDDDNS 
LTTLSFSDDP PSPNNDSLPR TIPYRRMSSR RYSPARSLGE STTFRNFVWK LGHPRGLLWL 
MCVIGLVSIS MTYMSTRNMA GRPGEIGRIQ VLYAGNHHVP LRTSRLKGGG VSGNFLRGFP 
APTSTSIAAR KSVPEQGRKS AVTLNHAIVD SRKISEVGVD EHLAKNYALK KNDDRKHLEV 
HKSKHDEGKH HHSHDEHKHS GNMKDKHHIE HKSTDKNDDR KDPANPEIQH EKRHDSSATN 
TELENHNEPK NSLTSVAMPL VPLSIPKSDY EAQDWRLYRA PAHSPSNVTH HRMVFVDPSL 
AHAPLRHRKV VSYPSDYTDP TQLYSILDSG DERIKRMEPR DPYVQGECVP MQPWQTTYHP 
LCNGVHELGI DQILGEETGS DMRLFGTKGF WRNAWRADIL NGHSHLHERD TIVIKTLKLQ 
HNFEEAHFEH DRIDAVAMER LTSSPHVINV FGFCGHTVMT EFADGKRLGE LADRAKKQPL 
ERLKIARDIA EGLADVHGID GDGNVSFVHL DINPANVVSI GGRLKLNDFN IGVPRRWNTT 
SNEPCGFPTQ YPNAQWRSPE EARQEENLTE KVDIFSLGHI FFRMICGHEP WSSFEPGGKP 
SADELHEKVG RGVLPTIPTN VLESKDPEVV AIRNAMIQCY TFIPSERPSA KQIARNLQKA 
LDKAELVQEA RP