Gene PHATRDRAFT_47657 details

Gene Information

• Locus tag: PHATRDRAFT_47657
• ID: 7202862
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 431827
• End bp: 433876
• Gene Length: 2050 bp
• Protein Length: 583 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002181906
• Protein GI: 219123177

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTATAACAGA CAGACTGCGT TGTTCTCCCT TTGGCTACTC ACAGTCAGAC CTTTACAGTT 
AGTCACTGCA TCAACCCTTC CTCGCCATTT ACCAATACAA CTAACGGTAG ATTCGTCTCG 
GTTCCGCATT GTCTCTCTCT CCTCCCGAGA CCAACTCCGA CCTCTTCCAC CACGACAATG 
CGTATGCCTT ATCGTATCAC CACAGCATTG GCGTGGGCGT GGACTCTTGC GAGTTTCACG 
CACGCGCAAA TGGGAACGAC TGCTCCGGTA GCGGCTCCTT CCGTCCTTCC CGTCGTGACG 
CCGACTCTGC TTCCGGTTGC GGCACCGACC AAGGCACCAG CCGCCGCAGT AGTACCGACC 
AAGGCACCCG CCGCCGCAGT AGTACCAACC AAGGCACCCG CAGCAACCGC GACTATAGCT 
CCGGTGGCAG TAGCGACTAC GGCTCCAGTG GCGGTCGCGA CTACGGCTCC AGTTGTGGTG 
GCTTCCGCCG CGCCCTCCGC TGCCGCCGTC AACGTTACTA CCGCACCAGT CGCGGTCGCC 
TCCGCCGCTC CTCTCGCTGC GGTGGCCTCC CAGGCTCCAT CCTCGGCGCC AGTCATGGTA 
CCGTCCGCTC TTCCGACGGG TAACACGTCC CCGGCACCGT CCGTAGTGCC AACCGACAGT 
CCCTCAGCAA TGCCGTCTGG AATTCCCACC AAGGCTCCCA CCGCAACCAG TGCCCCCACC 
GCTGTGGCTA CCGAAAGTCC CACCATGGGA CCCACCGTTG CCGCTACGAC TGGAACTCCC 
CTGCGTGTTG CCTTTCAAGG TATCCAACTC GTTCTGCCTG GTGTCATTAC TCTCAATCAA 
GGAGCGCAGG CAGATTTTGC CACCGTCACG GACCAATTCT ACGAGGACTT TTACAAACTC 
ACTGAATCGA GCCGACGTCA ACGTGCCTTG CAGACCTTTC AGTCGGCCGG CATTGCCGGG 
TTGCGCTCCA CCACCACCTT TCGTACGCAA ATGGTCACGA GTGACAACTC GGGTCCTACC 
AATACCATAG AATACGATCA ATTACTGGAG TACCGCGTTA TCGACAGCAA CCCCCTCAGC 
CCACCGGATT TGATCGTCGC TCCGTTTTTG TTATCGGATA TCAATCGTAA TTATACCGAT 
CGTTTGCGCG AATCCAATTC AGCCTTTTCG ACCATTCAGG ATGGTGGCTT GGACCCACCG 
GTTGTACCCG TAAATGGCGA TGGCGGCGGT GATGACGGTT TGTCGACCGG AATTATTGCC 
GGCATTGCCA TTGGTGCCGC GGTGGTAGCC GGGATCCTCG GGTACATTTG CTATTCCTGC 
ATGAACCGGG AAAGTAACGA CGAGTATGTG CCGTCCTCCT CGCCGACGCC ACAAGCCTTT 
TCCATTGCCA ATTCGGAAGA AGTCAGTACT CTGCACGATC CCATTCGCAC GGTTGGCTCT 
GGTGGTGGCT ATGGAGATCA AAGGTACGTG TTGGGATGGA CGAGTCCAAT CTGTGAAGGC 
CAAATGACTG GCATTTTGCA TTCTTTTCGG TTCTGGTTAA CTGTTGCTTA CATATTCAAA 
TGATTCCGCA TCTTTTTACA ACAGTGTCGC CACTGTAGAC TATGACTATT CCAAGGCGTA 
CGGGGGTGTG GGCGATGCTT CGGTTGTATC TTCGGCAGGA GGCACGCTGG GCGAAAACAC 
CCGATTGACT AAGGATGAAA CCACGACGGG AACTTTATCT CGTGCTGCAC TGGGTGCCGG 
CTACGACTCG GAAGCTCAAT ATGACAGGGA CGACAGCGTT CGAGAGGAAA TCATCGAAGT 
AGTCGCGCCG TCGGGCAAGC TCGGGGTGGT GATTGACACG CCTGACGACG GTGCACCGGT 
CGTCCACGCC GTCAAGGATT CTTCCGTAAT CGCGCATCAA ATAAAGGTCG GCGACAAGCT 
TATCGCTGTA GACGACCAAG ATGTCACCGC CATGACGGCA ATCAAGGTAT CCAAACTGAT 
CAGTAAGAAA AGTGCCAACC CGACTCGAAA GCTGACGATT ATCCGCTCGT CTCTATATGA 
TGATCACTGA 

 

Protein sequence

MRMPYRITTA LAWAWTLASF THAQMGTTAP VAAPSVLPVV TPTLLPVAAP TKAPAAAVVP 
TKAPAAAVVP TKAPAATATI APVAVATTAP VAVATTAPVV VASAAPSAAA VNVTTAPVAV 
ASAAPLAAVA SQAPSSAPVM VPSALPTGNT SPAPSVVPTD SPSAMPSGIP TKAPTATSAP 
TAVATESPTM GPTVAATTGT PLRVAFQGIQ LVLPGVITLN QGAQADFATV TDQFYEDFYK 
LTESSRRQRA LQTFQSAGIA GLRSTTTFRT QMVTSDNSGP TNTIEYDQLL EYRVIDSNPL 
SPPDLIVAPF LLSDINRNYT DRLRESNSAF STIQDGGLDP PVVPVNGDGG GDDGLSTGII 
AGIAIGAAVV AGILGYICYS CMNRESNDEY VPSSSPTPQA FSIANSEEVS TLHDPIRTVG 
SGGGYGDQSV ATVDYDYSKA YGGVGDASVV SSAGGTLGEN TRLTKDETTT GTLSRAALGA 
GYDSEAQYDR DDSVREEIIE VVAPSGKLGV VIDTPDDGAP VVHAVKDSSV IAHQIKVGDK 
LIAVDDQDVT AMTAIKVSKL ISKKSANPTR KLTIIRSSLY DDH