Gene PHATRDRAFT_47655 details

Gene Information

• Locus tag: PHATRDRAFT_47655
• ID: 7202860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 423386
• End bp: 424039
• Gene Length: 654 bp
• Protein Length: 185 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002182065
• Protein GI: 219123507

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00618585
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGTTG GATCTCTGCC GCTATCAGCG TTTGTTCCTC CTCCGCCCCC CAGTGCCATC 
AGCTTCCCAG TCAACCGACA TATGGTTAAG ACAGAGCATA TTATTAGTGA ACTGGGCTTG 
ACATTGCCAC CCGCACCTAC AGCGGCTGCG AATTATCAGC CGTGCCAGCG CGTTGACAAC 
GTCTTGTACC TCTCTGGTCA TTTGCCGCTT CGTGACGATG GAACGCTTCA TACGGGAACT 
CTTGGAAAAG ATTATGATGT ACAAGCTGGC TACCAAGCAG CTCGGCAGGT TGGATTGAAT 
CTCATCGCAT CTTTGAAACA CGAATTGGGA GATCTCGACA GAGTTGAGAA GATTGTGAAA 
CTTTTCGGAA TCGTCCAGTC CACAGATGAT TTCCATGAAC AGCACAAGGT AGTCAATGGA 
TGTTCTGATC TATTTTGTGA AGTATTTGGG AAAGAGCGAG GGATGCACGC ACGATCAGCG 
ATTGGTACAA ACGCCTTGCC CCTCGGAATC GCCGTCGAGA TTGAAGCCAT AGTTCTAGTG 
AGAGACACTT CAACTTAGGC GTACGACTGA TTGTGAGACG GAACTTTCAA TACGGTCTTG 
CGTGTGTTTA GTTCTTTGCA AGATAGAGCT ATAAAGCACT AAAGTTAACG GTAA 

 

Protein sequence

MQVGSLPLSA FVPPPPPSAI SFPVNRHMVK TEHIISELGL TLPPAPTAAA NYQPCQRVDN 
VLYLSGHLPL RDDGTLHTGT LGKDYDVQAG YQAARQVGLN LIASLKHELG DLDRVEKIVK 
LFGIVQSTDD FHEQHKVVNG CSDLFCEVFG KERGMHARSA IGTNALPLGI AVEIEAIVLV 
RDTST