Gene PHATRDRAFT_47650 details

Gene Information

• Locus tag: PHATRDRAFT_47650
• ID: 7202845
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 399208
• End bp: 406078
• Gene Length: 6871 bp
• Protein Length: 1517 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002182060
• Protein GI: 219123497

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATTTT TCTTGGCGAT GTCCGTGCTC ATAGGTTGTT TTGGAACTGC ATCGGCTGCA 
GTAGTTTTAA GTGAGAAGGT TTTGACACTC ACCAGGACTG TTGATCCAAC TCCTAGTAAG 
GACAACGTCT CACCAGAAGT TCAATCGCCT ACTGCTAAAC GCCAAGTCGC TTCCGTCCCA 
CACACAACGA ATCACAGCCC CACAGTCCCT ACGAATATCC AAGAGTACAA TGTAGACTCA 
TAATCTTCGT AGTTCATCGT TTTCCTCAAC TGTGATCTTC ATCGTCGTTT TGTGTTCTTC 
AATAGAACTA CGAAGCAACC CCACCGTCTT TACGCTCCCA GCCCTGCCCT ACCGCCCATC 
CGCCATCTCT TCGGTCCCGA TGTCGACCTC TGCTCACTTC AAACTGAGCG ACTTTCCTCA 
CAAAGTCCTG GATCCGATTG CCACCCTCAC CGTCCCACCG ACTTACGCGA CCATCAAACA 
TGCCCAACGT CAGCTCATGA CCAACGCAGC CGCCATCCCC ACGCTCAACG GTGGCGGCGC 
CCACGGCCAC ATGGCCTTAA CCCTCACCGC TCTCGCGTAC GCCGACATCA GCGACGTCCC 
GTTCGTCATT CCCGTCGCTC CCCCTGCCAA TCCGCCCCCC GGCGCCACGC AACCCCAAAT 
CACCGAGAAT AACCGCGTTC ACCAACGCGA CGCTGACATT TACAACCTTT ATGTCGCTGT 
TAACAACGCT CTCCGCCAAC AGCTTCTCGA TGCGATTCCC CGCATCTACG TACGCGCCCT 
CGCGCATCCC ATGTTCGAGT TCAGCAACGT CACGTGCCTT GACTTGCTTT CGCACCTCTG 
GACCAAATAC GGTACAATCA AGCCCGCTGA GCTCCAGAAA AATTTCCAGT CAATGTTCAC 
CCCGTGGAAT ACAACAGAAC CGATTGAATC CGTTTTTCTC CAGCTCGACG AGGCCATCGC 
CTTCTCCGTC GACGGTAACG ACCCCATCTC CGAAGCTGCC GCCGTACGAG CCGGCTATGA 
AGTCATCGCG CACTCTGGCC TGCTCCTCCT CGACTGCAAA GAATGGCGCA AATTACCCCT 
TGCTTCTCAC ACCCTTGCCA ACTTTCAGCA GCACTTTTCC CTTGCCGACG ACGACCGGCG 
CCTTACGGCC ACCACTGGTT CCCTCGGCTA TGCCAACGTT CTCGCTGCAA CCCCCTCTCT 
GACTCCAGCC ACGGTTTCCG ACACCCTCAG CCTTCCCTTC TCCGCGCTCT CTGTGTCACA 
GACTTCCGTC TCCTCTCCGG ATATGACCTA TTGCTGGACC CATGGGACCA GCAAGAACCG 
ACGCCATACG AGCGCCACGT GCAAGAACAA GGCCCCTGGC CATCGCGACG ACGCGACCGC 
CACCAACACT CTCGGCGGAT CCACCAAGGT TTGGACCGCT CCCAAGCCCC CTGAATAGGA 
AAGAGGGACG GCTACGCCGA TGGTTAACTC TAGTAATACC GATTATTTAA ATCATATTAC 
TAGTCTTAAT TCATCTGTAG CCCCCTCCCC GCCTAGTTCC CATACCTCGG CCATTGCCGA 
CACCGGTTGC ACCGGCCATT ACATCACCGT CAACTGCCCC CACACCCACA AACTTCCTGC 
ACGCCCCAGC CTTGCCGTCC GTGTCCCTAA CGGCGCCGTC CTCCGCTCAA GCCACATTGC 
CACCCTGGCC CTCCCTGGCT TCTCCCCTTC TGCTTGCCAG GCCCACATCT TCCCCGGGCT 
TACCTCGCAC CCACTCATTT CGATTGGACA ACTTTGTGAC GACGGCTGCA CTGCCACTTT 
CTCAGCCACT CGCCTCGAGA TCCACCGCGA CACTACACTA CTCCTCTCCG GCACTCGTGC 
ACCCACTACC GGCCTCTGGC ACCTTGATCT TACCCCTGCC AAGCCTCCTG CCACAGCCCA 
CGCTCTAGTT CCCAACACTC CCCTCGCTGA CCGCATCGCT TTTGTTCATG CCTCGCTCTT 
CTCCCCGGCG ATCTCCACAT GGTGCCAGGC CCTCGACTCC GGCCATCTTG CAACCTTTCC 
TGAACTTTCC TCCCGCCAGG TCCGCAAGTA TCCACCTCGT TCCCCCGCCA TGGTCAAGGG 
CCACCTCGAC CAACAACGCG CAAACCTTCG ATCCACCAAG CTTCCCCCTG TCGGTTCCCC 
CATCACGACG GCACCCCCTG CCGCCGCTGT GCCCGACCTT GACCCTCCCG ACGCCCACCC 
CGTCACACGC ACGCACCATG TCTTTGCTGC TCACCAGCGC GTCACCGGCC AAATATACAC 
GGACCAACCT GGCCGTTTCC TCACTCCTTC AAGTTCAGGC CACAACGACA TGCTTGTTCT 
TTATGATTAC GACAGCAACG CTATCCACGT CGAACTCATG AAGAACAAGT CCGGCCCCGA 
GATTCTGGCC GCTTATAAAC GCGCTCATGC TCTTTTCACC CAGCGAGGCC TCCGTCCCCA 
ACTCCAGCGG CTTGACAACG AAGCCTCTGC CGCCCTCCAG TCCTTCATGA CCTCAGAGCA 
CGTTGACTTT CAGCTGGCAC CCCCCCATCT ACACCGTCGT AATGCAGCCG AACGGGCCAT 
CCGCACCTTC AAGAACCACT TTATCGCTGG CCTATGCACC ACTAACCCGG ATTTTCCATT 
GCACCTTTGG GACCGCCTCC TCCCACAGGC CCTTATCACC CTCAATCTTC TTCGTCGCTC 
CCGCATCAAT CCTAAGCTGT CCGCCCACGC CCAGCTTCAT GGTGCTTTCG ACTACAACCG 
CACCCCGCTT GCTCCACCTG GCACTCGCGT CTTAGTTCAT GTCAAGCCGT CCGTCCGCGA 
AACTTGGGCC CCCCATGCTG TTGAAGGTTG GTACCTTGGC CCCGCCCTGC ACCATTACCG 
TTGCCACCGC GTCTGGGTCA CAGAAACACG TGCCGAACGC GTTGCTGACA CCCTTTCCTG 
GTTCCCGACC CGCATTCCCA TGCCCGCAGC TTCGTCCACC GACCGCGCCC TGGCCGCCGC 
CCGCGACCTA GTCCATGCCC TCCAGAATCC TTCCCCTTCG TCTCCGTTCG CCCCCCTCGA 
TGCCACCCAG CACCAGGCAC TCACAGATCT TGCCACCCTC TTTGCCACCG TGGCCACCCC 
GACCGACGAT GTCCCTGCAC CCGCTCCCGT GCCTCCGGTC CGTCCCCCTG CCCCCGCAAC 
TCCCCTTGCT CAGGTCCGTT TTGCCGTTCC TCTTGTCACG GCCGAACATG CCCCGGCACT 
TCCGAGGGTG CCCATTCCGG CCCCAGCACT TCCGAGGGTG CCCACCATGG CCACCTATCA 
CTCTCGCACC GGTAACCCAG GCCGTCGCCG CCGCAAAGCA CGCAAACAAC CGGCAACCCC 
AACCCTAGTA CCGGCGCATC CACACAACAC CCGCACCCGG CCCTTTCTTG TCCCGGCCTC 
CGCCAACGCT GTTGTCGACC CCGCCACCGG CGCCTCATTG GAATATCGCC ACCTGCGCTC 
CGGCCCTGAC GCTCCTGATT GGATTCACGC CGCAGCTAAC GAAATTGGCA GGCTCACCCA 
AGGTAACCCA CCCCACAGCA CCACTGGCAG CCAAACCATG CACTTCATCG CGCATACTGC 
CCTTCCTCCC GGTCGCAAGG CCACCTACTT GCGCATCGTA GCCAGCATTC GCCCTCAAAA 
GGCGGAACCC AAGCGCATCC GGTTCACCGT TGGTGGCAAC TTAGTTCAAT ACCCCGGAAA 
GGTTAGCACC CCAACTGCTG ACATCACCAC CGCCAAGATC CTCTTCAATA GTGTCCTCTC 
CACGCCCGCC GCCAAATTCA TGTGCATTGA CATCAAGGAT TTCTATCTTG GCACCCCCAT 
GGCTCGGTAC GAATACATGC GCATCCCGGT TCCCGATATC CCTCCCACCA TCATGGCTCA 
TTACCAGTTA GCTCCACTCA TTCACAACAA CTCTGTTACC GTCGAAATTC GCAAAGGTAT 
GTACGGCCTT CCCCAAGCCG GTATTCTCGC CCACGACCGT CTTGTTGAAC ACCTTGCTGC 
ACACGGCTAC GTTAAGACGA AGCATACCGC TGGCCTATTT CGACACGTCA CGCGCCCTAT 
TCAGTTTACC CTAGTTGTGG ACGACTTTGG AGTGAAATAC ACTGGCACCG AACACGCTCA 
ACACCTTATC GACACTCTCC AAGCGCTTTA CACCATCACC ATTGACTGGG ACGGCACTCG 
TTATCTCGGA CTTACACTTA CTTGGGATTA TGAGCGTCGA ACCCTCGACA TGTCCATGCC 
CGACTACATC GACCAAGCCC TAACCCGCTT TCAACGCTCG CCCCCTGTTA CGCCTCAACA 
TGCGCCTCAC CCTTGGACCC CTCCAACTTA TGGCGTTGCA ACTCAACTCA CACCAGTCCC 
TGATACCACT GAACCTCTCA ATGCATCCGA CAAGACCCAC CTGCAAGAAA TCATCGGAAC 
CCTACTTTAT TACGCTAGGG CTGTCGACTC GACCATTCTC GTGGCTCTCG GCACTCTGGC 
CTCGGCACAG TCAACTGCAA CCCAAGCGAC CCTTCACGCT GCCGAACATT TACTTGACTA 
CTGTGCCACT CACCCACACG CTACGGTACG GTTTCGGGCT AGCGACATGT GTTTACACAT 
TCATAGTGAC GCGTCATACC TTTCCGAGTC GAAAGCCCGT TCGCGTGCTG CAGGTCACTT 
TTTCCTCAGC CGTCGACCCA ACGATCCCAA TGCTGCTCCC GCTCCGACTG CTCCGGACCC 
TCCAAATAAT GGCGCCATTC ACACGCATAG CTCCATCATG TCCGTGGTTC TCTCGTCAGC 
CACCGAAGCA GAACTCGGTG CCCTCTTTTA CAACGCCAAG GACGCCACCG CTTTCCGGGT 
CACTCTCGAC GAACTTGGCC ACACACAGCC ACCTACGCCT ATCCAAACCG ATAACGCCTG 
TGCCTCCGGG ATTGCCAACG AAACCATCAA GCAACGACGT TCTAAAGCCA TTGACATGCG 
TTTCTATTGG GTTAAAGACC GCGTCGAGCA AAAACAGTTT ATTATTTACT GGCGACCCGG 
CCTCACAAAT TTGGCCGACT ATTTCTCCAA GCATCATTCT CCCGCACATC ATCGCAAAAT 
GCGCTCGCAC TACCTTCTCG AACAGTCACC CACCAATGAC AAAGCAACTT CTCATTTGCA 
GCGAGGGTGT GTTGATCCAA CTCCTAGTAA GGACAACGTC TCACCAGAAG TTCAATCGCC 
TACTGCTAAA CGCCAAGTCG CTTCCGTCCC ACACACAACG AATCACAGCC CCACAGTCCC 
TACGAATATC CAAGAGTACA ATGTAGACTC ATAATCTTCG TAGTTCATCG TTTTCCTCAA 
CTGTGATCTT CATCGTCGTT TTGTGTTCTT CAATAAGGAC TTCAGCGGAG CTTTCTGCTC 
TCGCTTACCT GCCAGAACCC AACGGCACGG GGTTCGACAT TCTGGAAGTG TTCATCGATG 
AGCCTGACCA AGCTCTGATT GCGTCCAAAG ACGGATACTG CTTTGCAGCT TTTCGAGGAA 
CAACCTTGAC GAAGGAGGAT TGGAAGCAGA ATCTCATTTT AGGCAATGAA GACATTTGTA 
CCACAACTGG CTCTCAGGAG CGATGTTGCT CAACCCGTCG TGGATTTTTT CAAGCCTACG 
ACACCACCTA CAAAGATATG CTCATAAAGT CCCTCCGCTC GTGCGCTTCC GCATGCAAGA 
ACAAGGATGA ATGCGTCGTT TTGACCGGTC ATTCTCAGGG TGGAGCTGTG GCAGCTGTTG 
CTGGTGTTGC ATTGGCAGAT CTCAATCCCT ATGTTATCAC ATTTGGACAG CCGCCTACAA 
TTGATGCTCC GTGTGCAGCT ATCACAAGTG AGCGCTGGTA TCGCTACGTC AATAGCAAAG 
ATTCCGAATT GTTGAGCTTT GGAATAGTGT ACGACCCTAT TCCTTTCGCG CCCGGTCTAG 
GCGCTGATTC TTTTGGGCAT ATGATTATGA TTAGTGGGGA CAACTCGGGC GTTGCCTACA 
TTGGATTGGA CGCTCAAGAC TTTTTTGGAC CTCTGAACGT GAAGGGTTTC GAAGCTCACA 
GTATGATTGG TGCAGAAGGA TCTAAATATC CGGGCTACTT GGACCGCATC GTTGCTATTA 
TGGAGTACTA TGCAGAGAAG GGAACATATC CTGTTCGTAC AACAGGATAC TTGCCGAACT 
CACTGTGTAC CGAAGCCAAA GAATGTGAGA CAGGTGAATG TGTAAAGGAG ACCGGTCTGT 
CGTGGGCTCG TTGTGTGGGA ACCCAGTGCG ACGAGGATAT GGACTGCCCC GAGACTGGAC 
GGTGCGACTC AGGCATTTGC GTTCCCAAAC TCGGCTCTTG CCAGCCTTGT GACGAAGATT 
CGGATTGTGA GTCTGACCAC TGCACTTGGC ACTTTGTATG CACGAATATG GAAGGTCTCA 
TAGATAACGA GTGCGGGTGC AGCGTGAACT CGGATTGTAA ATCGGGACGA TGCGAAGGCT 
GGGCTCCTCC AATTTGTGAA GCTCGTTTAG GTGACGGTGC AACCTGCAAC GAAGACTCGG 
ATTGCCTCTC GAATGACTGC TCTTGGAGCT TTAGATGCCG CGGAGGTGAC AAAAATTTAG 
CAATAGCCAC AACCATCTCG GCAAAACAGA TTGTGATGAA CGCACGCAGT ATTGACATTG 
CCGCCAAAGC CCATCCTACA CGTGTATCCG AGCCCACATC GAATTCGAAA GTTAAAATCG 
GAGGTGTGTT CGGTATCGTT GCGTTGGCTG TCATAGGCTT TGCAGCAATC AAATGGTATC 
GTCATCGTCG TCATGGATAC GAAGAAATTC CTGCCCAGAT AAACGTCTGA GCAACACGGT 
AAAGCAGCTC TGTTAAGTGT GTTTGTTCGA T 

 

Protein sequence

MRFFLAMSVL IGCFGTASAA VVLSEKVLTL TRTVDPTPKL RSNPTVFTLP ALPYRPSAIS 
SVPMSTSAHF KLSDFPHKVL DPIATLTVPP TYATIKHAQR QLMTNAAAIP TLNGGGAHGH 
MALTLTALAY ADISDVPFVI PVAPPANPPP GATQPQITEN NRVHQRDADI YNLYVAVNNA 
LRQQLLDAIP RIYVRALAHP MFEFSNVTCL DLLSHLWTKY GTIKPAELQK NFQSMFTPWN 
TTEPIESVFL QLDEAIAFSV DGNDPISEAA AVRAGYEVIA HSGLLLLDCK EWRKLPLASH 
TLANFQQHFS LADDDRRLTA TTGSLGYANV LAATPSLTPA TVSDTLSLPF SALSVSQTSV 
SSPDMTYCWT HGTSKNRRHT SATLNSSVAP SPPSSHTSAI ADTGCTGHYI TVNCPHTHKL 
PARPSLAVRV PNGAVLRSSH IATLALPGFS PSACQAHIFP GLTSHPLISI GQLCDDGCTA 
TFSATRLEIH RDTTLLLSGT RAPTTGLWHL DLTPAKPPAT AHALVPNTPL ADRIAFVHAS 
LFSPAISTWC QALDSGHLAT FPELSSRQVR KYPPRSPAMV KGHLDQQRAN LRSTKLPPVG 
SPITTAPPAA AVPDLDPPDA HPVTRTHHVF AAHQRVTGQI YTDQPGRFLT PSSSGHNDML 
VLYDYDSNAI HVELMKNKSG PEILAAYKRA HALFTQRGLR PQLQRLDNEA SAALQSFMTS 
EHVDFQLAPP HLHRRNAAER AIRTFKNHFI AGLCTTNPDF PLHLWDRLLP QALITLNLLR 
RSRINPKLSA HAQLHGAFDY NRTPLAPPGT RVLVHVKPSV RETWAPHAVE GWYLGPALHH 
YRCHRVWVTE TRAERVADTL SWFPTRIPMP AASSTDRALA AARDLVHALQ NPSPSSPFAP 
LDATQHQALT DLATLFATVA TPTDDVPAPA PVPPVRPPAP ATPLAQVRFA VPLVTAEHAP 
ALPRVPIPAP ALPRVPTMAT YHSRTGNPGR RRRKARKQPA TPTLVPAHPH NTRTRPFLVP 
ASANAVSPTN DKATSHLQRG CVDPTPKPNG TGFDILEVFI DEPDQALIAS KDGYCFAAFR 
GTTLTKEDWK QNLILGNEDI CTTTGSQERC CSTRRGFFQA YDTTYKDMLI KSLRSCASAC 
KNKDECVVLT GHSQGGAVAA VAGVALADLN PYVITFGQPP TIDAPCAAIT SERWYRYVNS 
KDSELLSFGI VYDPIPFAPG LGADSFGHMI MISGDNSGVA YIGLDAQDFF GPLNVKGFEA 
HSMIGAEGSK YPGYLDRIVA IMEYYAEKGT YPVRTTGYLP NSLCTEAKEC ETGECVKETG 
LSWARCVGTQ CDEDMDCPET GRCDSGICVP KLGSCQPCDE DSDCESDHCT WHFVCTNMEG 
LIDNECGCSV NSDCKSGRCE GWAPPICEAR LGDGATCNED SDCLSNDCSW SFRCRGGDKN 
LAIATTISAK QIVMNARSID IAAKAHPTRV SEPTSNSKVK IGGVFGIVAL AVIGFAAIKW 
YRHRRHGYEE IPAQINV