Gene PHATRDRAFT_47612 details

Gene Information

• Locus tag: PHATRDRAFT_47612
• ID: 7202819
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 271330
• End bp: 274013
• Gene Length: 2684 bp
• Protein Length: 793 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181876
• Protein GI: 219123115

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTTCTTTTTG GTATCCGACT CGAAAAGATC CATCACGGCG AGCATGAATC TTCGTTGTAT 
CCTTCCGTTT CTCCTCGCAA GCTTCTCGGC TGGGGCTTTT GTGTTCAATC GTGTGGCAAC 
GTTCAATATT TGTACGCAGA TTGATCCCAC GTGTAACACC GACACCGAAG CAGTTGCCGA 
GATTGTTGAT GCATCACCTG ACGGTAACAC TCTATTGTAT ACTGATGGCG TCGCTGGGAA 
CATTGGCCTT GTTGACATTT CAGATCCTTC CAATCCTGTG GGACTTGGAA CAATCGATGT 
AGGTGGTGAG CCTACATCCG TCGCAGTGAC TGGCGACGGC TTGTACGCTG TAGCAGCCGT 
GAACACTTCT CCTGACTTTG TGAATGTCAC CGGGAATTTG ATTGTCATCG ACATCGAATC 
CCAGTTAATT GTGGCCACCC TCCCTCTACC AGGTCAACCT GACTCACTTA AGGTTTCTCC 
TGACAATCAG TTCATCGCCA TTGCTATAGA AAACGAACGC GATGAAGATC TCGGGGACGG 
GGCCCCTCCC CAGATGCCTC CTGGCTCGTT GGTTGTTGTT GACAAGAGCG ATACTGATCC 
AACAATGTGG TCGACGACTC TTGTCAACCT GACCGGACTC GACGGCTTGC GATTCCCCGA 
GGATCCCGAG CCTGAGTTTG TCGACATCTC GACCGACAAC GTCTGCGTGA TCACTCTTCA 
GGAAAACAAC GGCATAGTTA TCCTTGACCT GGCTTCTCTT AGTGTTTTGA CTAGCTTTTC 
GGCTGGGGCG GTGGCAGAAA TCACTCAAAT TGACGCCACT GAAGATGACA TGATTTCGCA 
GACTGAAAGT CTTAACGACA TCCTTCGCGA GCCCGACAGT GCTGTGTTCA TTGGAACCGA 
CTACTTCGCC ACAGCCGATG AGGGTGACCT AGATGGAGGG TCTCGCGGGT TTACAATTTT 
TGGTCTTGAC GGCACCGTTG TTTACGAGTC CGGAAACTTC TTGGAACACG CTACTGCTCG 
CTACGGACAC TACCCAGAAG GTCGTTCCGA GAACAAGGGA AACGAGCCCG AGGGTATGAC 
CTATTCAACT TTTGGTGACG AGAACCTTCT GTTTGTTCTA TCCGAACGCG CGAACACTGT 
CTACGTCTTT AACGTCGACC CGACAGATCC ATCAAATGTT TCGTTTAAGC AAGTCCTTCC 
CAGTGGTGTC GGTCCAGAGG GTGTCACGGC TATTCCAAGC AGAAATCTGT TAGCGGTCGC 
GTCGGAAGTG GATGATCGAG GTGCTGCCAT TCGCAGCAGT ATTACCATTT ACGAATATGC 
CGAAGGAACA GCCGCCTACC CTACTCTAGT GTCAAACAAC CGCGCGGATG GAACTCCTAT 
ACCGTTTTCA GCCCTTTCTG GACTGGCTGC TGCAGGTAAG TGCACAGGCT CCCCTCTCTC 
TTCCCACATA CTTACAGAGA TATTTTCAAA TCTCTGACTT TGTGTCTCTT TCGTGCATCG 
CTAGATGCGC CAGGAATAGG TGGTCAAGCC GGGATATTGT ATTCTGTTGA TGACTCATTC 
TACTCGAAAA GCAGAATTTT CACGATCGAT GTCACTTCCT TCCCTTACGC GATTACTAAT 
GAAATGCGTG TCATGGACTC CGACGGCGTC CTTGCGGCTG CTTTCCCCAA CAGCACTCTT 
GTCAACGACG ACATGACGGT CAACCTTGAC CAAGAAGGAA TTGCTGTTTC TCGGGAGGGC 
GGATATTGGA TTGCCAACGA AGGTGCAGGT ACAGTGGGTG ACATCGAGAA TCCTGTCACC 
ACTGCAAACT TTGTTGTTAA GGTGTCGACG GAGGGTGTAA TAGAGACCGT AGTCACCTTA 
CCTGAAGAGA TAGATGCTAT TCAAGTTCGC TTTGGCTTCG AAGGTATTGC TGAGTACGGT 
GATTTCATTG TTGTCGCATT TCAACGCGCA TGGGGAGAGG AGGCCAATCC GCGATTGGGG 
ATCTACGATA CAACTTCTAG TACATGGAAA TTTGTCTTCT ACCCCCTCGA TACGCCCTCT 
TCTCAGAACG GAGGATGGGT CGGTATTGGA GATCTTTCTC CAGTCGGCAA TGGCGACTTT 
GTGGTCCTTG AGCGCGACAA TCAAGGTAAG ACTTGCACGC TGCTGCGTGA CACTTAAACT 
GATTCTCTTT CGCTCATTGT GTACTCAACT TTTACAGGAG GACCTGATGC CGCCATCAAA 
AAGATATACA AAATAAGCCT TGGCTCGATG CTTGAGGTCG AGGAAAGTAC TACGGTCGAG 
AAGACTTTGG TGAGGGACGT CTTACCAGAC CTTGCTGCGT CGAATGGCAA TATTTATGAG 
AAACTTGAGG GTCTTGCTGT GACTAGCGAA GGAGAAGTGT GGATCAACAA CGACAACGAT 
GGCGTTGACG ACAACAGTGG GGAGCAGCAG CTTATTAGTC TGGGAATGAT CGTCACCATT 
CCCGAGGGAA CAGCAACTCC TATTGAAGAC TCCCCGACTG TGTCGCCCGT GCAAGGAACT 
AGTATGGCCA ATCGAGTAGG CCACGGAGGT GCTCTTCTCG TCTTCGGCTT CTTTGCTTTA 
TTGTGAGTAT AGAAGGTCAC GTAGCTAGAG AAAGAAAGAG TTAATCTCAA AAAGAGTCAA 
GTCCACGAAC TTCAAATAAA CTATAAGCCT TCTTTCGTTG ACCC 

 

Protein sequence

MNLRCILPFL LASFSAGAFV FNRVATFNIC TQIDPTCNTD TEAVAEIVDA SPDGNTLLYT 
DGVAGNIGLV DISDPSNPVG LGTIDVGGEP TSVAVTGDGL YAVAAVNTSP DFVNVTGNLI 
VIDIESQLIV ATLPLPGQPD SLKVSPDNQF IAIAIENERD EDLGDGAPPQ MPPGSLVVVD 
KSDTDPTMWS TTLVNLTGLD GLRFPEDPEP EFVDISTDNV CVITLQENNG IVILDLASLS 
VLTSFSAGAV AEITQIDATE DDMISQTESL NDILREPDSA VFIGTDYFAT ADEGDLDGGS 
RGFTIFGLDG TVVYESGNFL EHATARYGHY PEGRSENKGN EPEGMTYSTF GDENLLFVLS 
ERANTVYVFN VDPTDPSNVS FKQVLPSGVG PEGVTAIPSR NLLAVASEVD DRGAAIRSSI 
TIYEYAEGTA AYPTLVSNNR ADGTPIPFSA LSGLAAADAP GIGGQAGILY SVDDSFYSKS 
RIFTIDVTSF PYAITNEMRV MDSDGVLAAA FPNSTLVNDD MTVNLDQEGI AVSREGGYWI 
ANEGAGTVGD IENPVTTANF VVKVSTEGVI ETVVTLPEEI DAIQVRFGFE GIAEYGDFIV 
VAFQRAWGEE ANPRLGIYDT TSSTWKFVFY PLDTPSSQNG GWVGIGDLSP VGNGDFVVLE 
RDNQGGPDAA IKKIYKISLG SMLEVEESTT VEKTLVRDVL PDLAASNGNI YEKLEGLAVT 
SEGEVWINND NDGVDDNSGE QQLISLGMIV TIPEGTATPI EDSPTVSPVQ GTSMANRVGH 
GGALLVFGFF ALL