Gene PHATRDRAFT_47583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47583 
Symbol 
ID7202641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp169737 
End bp171158 
Gene Length1422 bp 
Protein Length296 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181859 
Protein GI219123079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TACAATGGAA GGTGGAGCCT TTCGCGTCTT TGCCCTATCG CTGTATCTCG TACTGAGCTG 
GGGTGCGCAT GCTACACGTG CCTATTCATT AGCTGGCAAA CGGGTGCTCG TGACGGGCGC
GTCCGGAGGA ATTGGCAAGG GCATTGCGCT CGAATTGGGA CGTCAGGGAT GCGAGGTACT
AATACACTAT CACGTGCGTG AAAAAGGGGC GGCAGAAACG CGCGACGAGA TACTGGCTTC
CGGGGGCTCT TGTGCCGGGA TTACGCAGTG TGATTTTCGG CAATCGTCGA ATATTCACGA
TCTTTTTCGA TACGTGGATC AACTGTGGCC CGAAGGGTTC GATATTCTCG TAAATAACGC
CGGTATTGTC ACGAAATTAG CGCTGGAAGA CGATGATGAT GAGGGACTAG TAGCCTGGCA
CGAAACAATG GCCGTAAATT TGCATGCGCC ACGCCTGCTT AGTCATCTTG CTTTGCATCG
CATGAAGCAA CGGGACGAAG GTGGTGTTAT ACTCATGGTT TCCAGTATCC ATTCCGAAAA
GTCCAACGAG TATGTTGGTG CCTACGCTGT CAGTAAAGCG GGATGGGATG CGCTGACGCG
TGCAATGGCC TTGGAATATG CCCAACATAA CGTTCGTGTA AATTCCATCA ATCCTGGAGT
TGTCCCCGTA GAACGGACTG CCGAGGCTTT TGCCGACCCT TCCAACGTCC AAGCCTGGGC
CGACCGCATC CCATTGGGAA AGCTGGGAAC AGTCGAACAC GTTGCCCAAG CGTGTCTTCC
TTTGCTGACC AACGATTGGA TTACTGGAGC GATTTGGCAA GTGGATGGAG GCATGATGGC
TCGGAGTAAC ATGCCAACGA GACCGAGGCC ACTCAAATTT GGAGGTATTT GCTAGCTTGT
AGAAAGTAAA CGATTCACGC GTTATGATAA GAATGTAATA CAGGAAGTAT TGTGTCCACG
CTTTGATAGA GGATAGAGAC CCATCATATT TAACGAAACG CAATGGCCCG AGGGTTAAAG
GCAGCCCCTG CCTGCCAGGT AATTCTCCGT TCCTTACGGT ATTCTTCCAA ATCGGTAAAG
CTCTGACGAC AGCAAGGGCA GGGCGTGCCG TCCTGCATTT TGGTCAACCA ATCCACGATG
CACGCGGCAT GAAAGGCGTG CAGGCATGAC CGGTTGCTCG ACCACACAAC TTTTTCGCCC
AATTCGTATT CTCCGAGGCA AATGGCGCAA ATATTTGGTA CATTCCGAGC TGGATCGGAC
TCGTGGCGCA AACGCAGATA ACCTTGTAAT CCAGCTTCCA CATCTGCTCC TATGGGTCCA
AACACACTCG AGCTTGAAAC TTGTGAGGTG TTGTTGTTGT TTTCCATGGC ATTTTGGGGG
CCCGACACTT TGTCGATTGC ATTGCTTTCG TCGCCTGCGC TG
 
Protein sequence
MEGGAFRVFA LSLYLVLSWG AHATRAYSLA GKRVLVTGAS GGIGKGIALE LGRQGCEVLI 
HYHVREKGAA ETRDEILASG GSCAGITQCD FRQSSNIHDL FRYVDQLWPE GFDILVNNAG
IVTKLALEDD DDEGLVAWHE TMAVNLHAPR LLSHLALHRM KQRDEGGVIL MVSSIHSEKS
NEYVGAYAVS KAGWDALTRA MALEYAQHNV RVNSINPGVV PVERTAEAFA DPSNVQAWAD
RIPLGKLGTV EHVAQACLPL LTNDWITGAI WQVDGGMMAR SNMPTRPRPL KFGGIC