Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47583 |
Symbol | |
ID | 7202641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | + |
Start bp | 169737 |
End bp | 171158 |
Gene Length | 1422 bp |
Protein Length | 296 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181859 |
Protein GI | 219123079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TACAATGGAA GGTGGAGCCT TTCGCGTCTT TGCCCTATCG CTGTATCTCG TACTGAGCTG GGGTGCGCAT GCTACACGTG CCTATTCATT AGCTGGCAAA CGGGTGCTCG TGACGGGCGC GTCCGGAGGA ATTGGCAAGG GCATTGCGCT CGAATTGGGA CGTCAGGGAT GCGAGGTACT AATACACTAT CACGTGCGTG AAAAAGGGGC GGCAGAAACG CGCGACGAGA TACTGGCTTC CGGGGGCTCT TGTGCCGGGA TTACGCAGTG TGATTTTCGG CAATCGTCGA ATATTCACGA TCTTTTTCGA TACGTGGATC AACTGTGGCC CGAAGGGTTC GATATTCTCG TAAATAACGC CGGTATTGTC ACGAAATTAG CGCTGGAAGA CGATGATGAT GAGGGACTAG TAGCCTGGCA CGAAACAATG GCCGTAAATT TGCATGCGCC ACGCCTGCTT AGTCATCTTG CTTTGCATCG CATGAAGCAA CGGGACGAAG GTGGTGTTAT ACTCATGGTT TCCAGTATCC ATTCCGAAAA GTCCAACGAG TATGTTGGTG CCTACGCTGT CAGTAAAGCG GGATGGGATG CGCTGACGCG TGCAATGGCC TTGGAATATG CCCAACATAA CGTTCGTGTA AATTCCATCA ATCCTGGAGT TGTCCCCGTA GAACGGACTG CCGAGGCTTT TGCCGACCCT TCCAACGTCC AAGCCTGGGC CGACCGCATC CCATTGGGAA AGCTGGGAAC AGTCGAACAC GTTGCCCAAG CGTGTCTTCC TTTGCTGACC AACGATTGGA TTACTGGAGC GATTTGGCAA GTGGATGGAG GCATGATGGC TCGGAGTAAC ATGCCAACGA GACCGAGGCC ACTCAAATTT GGAGGTATTT GCTAGCTTGT AGAAAGTAAA CGATTCACGC GTTATGATAA GAATGTAATA CAGGAAGTAT TGTGTCCACG CTTTGATAGA GGATAGAGAC CCATCATATT TAACGAAACG CAATGGCCCG AGGGTTAAAG GCAGCCCCTG CCTGCCAGGT AATTCTCCGT TCCTTACGGT ATTCTTCCAA ATCGGTAAAG CTCTGACGAC AGCAAGGGCA GGGCGTGCCG TCCTGCATTT TGGTCAACCA ATCCACGATG CACGCGGCAT GAAAGGCGTG CAGGCATGAC CGGTTGCTCG ACCACACAAC TTTTTCGCCC AATTCGTATT CTCCGAGGCA AATGGCGCAA ATATTTGGTA CATTCCGAGC TGGATCGGAC TCGTGGCGCA AACGCAGATA ACCTTGTAAT CCAGCTTCCA CATCTGCTCC TATGGGTCCA AACACACTCG AGCTTGAAAC TTGTGAGGTG TTGTTGTTGT TTTCCATGGC ATTTTGGGGG CCCGACACTT TGTCGATTGC ATTGCTTTCG TCGCCTGCGC TG
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Protein sequence | MEGGAFRVFA LSLYLVLSWG AHATRAYSLA GKRVLVTGAS GGIGKGIALE LGRQGCEVLI HYHVREKGAA ETRDEILASG GSCAGITQCD FRQSSNIHDL FRYVDQLWPE GFDILVNNAG IVTKLALEDD DDEGLVAWHE TMAVNLHAPR LLSHLALHRM KQRDEGGVIL MVSSIHSEKS NEYVGAYAVS KAGWDALTRA MALEYAQHNV RVNSINPGVV PVERTAEAFA DPSNVQAWAD RIPLGKLGTV EHVAQACLPL LTNDWITGAI WQVDGGMMAR SNMPTRPRPL KFGGIC
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