Gene PHATRDRAFT_47574 details

Gene Information

• Locus tag: PHATRDRAFT_47574
• ID: 7202636
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 151671
• End bp: 153973
• Gene Length: 2303 bp
• Protein Length: 605 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002181855
• Protein GI: 219123071

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0105837
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACAGTGAGAA AGAATCCAGA GAATCACGCC GGCGCCGATG GCGTTGTTAA AGACTTCGCT 
AATCGGATTT CTCCAACAAT ATTGAGAAGA AGGAGCCGGC AAGAAAAACC CGCATCTATC 
CCATTCCCGA GGTAGTTGAT CGTCACCGAT AAGTTTCATC GTTGGTAGGT GTCAATGGGA 
TCGTTGTCAC CTCCAATCCT GACTGCCCCA CAAGGTACAC AAGTGCAGAA TATGATTCAA 
GCCTACATTG ATGGACGACA ACCGTACTGT TGTCCATCAA ACCCTTCTAC CGCAGCATCC 
GGCCCTATCG TCTACGAGGA GCAGCAGACA CTGTCGACGT CGAGTACCTT GGCTGCTCCG 
TACTCGTCCC AACCGACTAC CAAACAGACT CCTCCTACCG TTGTAAGATC GGGCATCCCG 
TCTGATCATC GGAAAGGAGA TCAAGAATAT CAAATCCACC AAATCGCCGT CGCTGCTGCT 
ATCGGCGTCA TTCCCAACCG ATCCGTTCGG GATACCGCTC GCTTAGTTCA TCGCGTTCTA 
CAGCAACAGG AACACCGGCC TTCATCACAG GCACCGACTC CGCTGGAAGC CTTGCCTACC 
CTGCTCTACA ATCCAAGAAG CTCTTCGCTA AACGAAGCGT TAGCCTCGGC CTCCACCGAC 
ACAATTGTCA TTTTCCGCCG GACCAGAAGT TGCCGTGGAG GATATCTTGT GGATGCCGGT 
CTCGTGTGGT ATGACCGCCC TACACGTCGC CGCACGCATG TTGGTCTGGG TGCAATATGT 
CGGCGATGAC GATGCACACC AGCCATGGAA CGTGCGCTTT GTTGCCAACG TTGTCGAACG 
CCAGCTTGCA CAACGACAAT CACGATTGCA AAATATGCCG TATCCGTGCA CATCCAACAC 
CGCCGCACGC AACTGGTGGC GCTGGCTCGT TCAACAAGCG TCCGAAACGG ACCAAGCCCG 
TCGCAATCCT GTGCGCAAGC GAGATTCCGG TGGCGATTCC GTGTTTGATA CCTTTTGGGC 
CACGTGGGCG CACCCAACGC CGTCGACAGC GGGTGCCGGC CGAACTGTCA CTGACTATGG 
CACACGGCCG GCTCCGCCTC CGCCGCCCTT TGTGGCCCGC TTTCCAGTGG CACTGGATCA 
AGTTCTCGCC TCACCGTACC ACTTACATCT TTTGCAGATT TGTATACAGC GCCAACGGCA 
AGCCAGTATT CAGAACATTA CGTTTGCAAT GGATGAGACT ATCCCCGACG CTGTCTACAT 
TGTCGCTCGC TTCTGGTGGG CCTTGACGAT TCTGTTGGAC GGGGCACGAG GCGAAAACGT 
GCACTCGAGC GCTAGCGCTA GGGAGAGCAA AGTTGCCTCT ACTCCCGCCG TGTTGCCTAT 
TGTCCCCTTT CTGGCATCTA CTGGGTCTTG TCCGGAGCGT CTCGCTCGTT TGGTATTCTG 
TTTGTTTCCC GAGCAGCTCT CGTACATTGT TCCGGACACT GGCGCCACAG TGTTGCACCT 
GTGGGCTGCC GCTCCCAACC CGATTCATGA AGAACGTGAC GGTATGCTGA TCCCTCTCTT 
ACGCACTTGT CCGGCGTTGG CTGCTGTGAA AGACAACCGA GGCCGTTTGC CTATCCACGT 
AGCCCTGCAT TGGAACAAAG CCATGCCGGA CGTTCGTGCG TTGTGGGAAC ACGCCCCCCA 
TACCGTTCAC GTTCCAGATC CGCTCAAGCC GACTTTACCG TTGGTTGTCC TCGTCACGTT 
GACTGCCCGC AAACAGAAGA TGAACACCTT GCGCGCGCTG GAGCGACGCA ACCCCGCCGT 
ATCGTTGGCG GAATGGTTGG ACGCAACGCG CGATACCGAA ACGTTACAAG GTACGCTTCA 
GTGTCAGCTG CTGAGTTCAA TATACGACGT GTTGCGGACG TTCCCGCAGG CGTTGCAATC 
GAATTAGGCT TGTACAGCGA GTGCTTTGTG CTTGGGGTTT ATTGAGCGGA CCTTTGTTGT 
TCGGCACGTA CACGATGAGG TGCCATTGGA AAGTGATTAT CCGCCGCAAC GGGCCCCAAC 
TAGCGTTCCA GCTAGTCCTC TTAGCCTATT CACGTAAGTA TCGACACGAG TAGTCTTGCA 
AAATCCGTGG AGACGGCGAG CCATTGAAAG CTCCATCTTC ACTTTTACTT ATCCACAGCT 
TTCCCCGTGT TAGGAAATCC GTTGATCGTT GTCTCAGACA TTCACTCATA TAGAGCTTGG 
ATGAGACAGT GCTCCCTTCC TATCACTGTG GCAGTTATCC TGGTGGTCCA AACATCCCTA 
AAGACGAAGA TTGCTCTTAC TAG 

 

Protein sequence

MGSLSPPILT APQGTQVQNM IQAYIDGRQP YCCPSNPSTA ASGPIVYEEQ QTLSTSSTLA 
APYSSQPTTK QTPPTVVRSG IPSDHRKGDQ EYQIHQIAVA AAIGVIPNRS VRDTARLVHR 
VLQQQEHRPS SQAPTPLEAL PTLLYNPRSS SLNEALASAS TDTIVIFRRT RSCRGGYLVD 
AGLVWYDRPT RRRTHPWNVR FVANVVERQL AQRQSRLQNM PYPCTSNTAA RNWWRWLVQQ 
ASETDQARRN PVRKRDSGGD SVFDTFWATW AHPTPSTAGA GRTVTDYGTR PAPPPPPFVA 
RFPVALDQVL ASPYHLHLLQ ICIQRQRQAS IQNITFAMDE TIPDAVYIVA RFWWALTILL 
DGARGENVHS SASARESKVA STPAVLPIVP FLASTGSCPE RLARLVFCLF PEQLSYIVPD 
TGATVLHLWA AAPNPIHEER DGMLIPLLRT CPALAAVKDN RGRLPIHVAL HWNKAMPDVR 
ALWEHAPHTV HVPDPLKPTL PLVVLVTLTA RKQKMNTLRA LERRNPAVSL AEWLDATRDT 
ETLQASALCL GFIERTFVVR HVHDEVPLES DYPPQRAPTS VPASPLSLFT YPGGPNIPKD 
EDCSY