Gene PHATRDRAFT_47570 details

Gene Information

• Locus tag: PHATRDRAFT_47570
• ID: 7202634
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: -
• Start bp: 141549
• End bp: 143571
• Gene Length: 2023 bp
• Protein Length: 609 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002182010
• Protein GI: 219123393

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0215149
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAAG CCTACATTGA TGGACGACAA CCGTACTGTT GTCCATCAAA CCCTTCTACC 
GCAGCATCCG GCCCTATCGT CTACGAGGAG CAGCAGACAC TGTCGACGTC GAGTACCTTG 
GCTGCTCCGT ACTCGTCCCA ACCGACTACC AAACAGACTC CTCCTACCGT TGTAAGATCG 
GGCATCCCGT CTGATCATCG GAAAGGAGAT CAAGAATATC AAATCCACCA AATCGCCGCA 
GCCTCGCATA CTAACCGATC CGTTCGGGAC ACCGCTCGCT TAGTTCATCG CGTTCTACAG 
CAACAGGAAC ACCGGCCTTC ATCACAGGCA CCGACTCCGC TGGAAGCCTT GCCTACCCTG 
CTCTACAATC CAAGAAGCTC TTCGCTAAAC GAAGCGTTAG CCTCGGCCTC CACCGACACA 
ATTGTCATTT CCGCCGGACC AGAAGTTGCC GTGGAGGATA TCTTGTGGAT GCCGGTCTCG 
TGTGGTATGA CCGCCCTACA CGTCGCCGCA CGCATGTTGG TCTGGGTGCA ATATGTCGGC 
GATGACGATG CACACCAGCC ATGGAACGTG CGCTTTGTTG CCAACGTTGT CGAACGCCAG 
CTTGCACAAC GACAATCACG ATTGCAAAAT GTGCCGTATC CGTGCACAAC CAACACCGCC 
GCACGCAACT GGTGGCGCTG GCTCGTTCAA CAAGCGTCCC AAACGGACCA AGCCCGTCGC 
AATCTTGTGC GCAAGCGAGA TTCCGGTGGC GATTCCGTGT TTGATACCTT TTGGGCCACG 
TGGGCGCACC CAACGCCGTC GACAGCGGGT GCCGGCCGAA CTGTCACTGA CTATGGCACA 
CGGCCGGCTC CGCCTCCGGC GCCCTTTGTG GCCCGCTTTC CAGCGGCACT GGATCAAGTT 
CTAGCCTCAC CGCACCACTT ACATCTTTTG CAGATTTGTA TACAGCGCCA ACGGCAAGCC 
AGTATTCAGA ACATTACGTT TGCAATGGAT GAGACTATCC CCGACGCTGT CTACGTTGTC 
GCTCGCTTCT GGTGGGCCTT GACGATTCTG TTGGACGGGG CACGGGGCGA AAACGTGCAG 
TCGAGCGCTA GCGCTAGGGA GAGCAAAGTT GCCTCTACTC CCGCCGTGTT GCCTATTGTC 
CCCTTTCTGG CATCAACTGG GTCTTGTCCG GAGCGTCTCG CTCGTTTGGT AGTCTGTTTG 
TTTCCCGAGC AGCTTTCGTA CATTGTTCCG GACACTGGCG CCACAGTGTT GCACCTGTGG 
GCTGCCGCTC CCAACCCGAT TCATGAAGAA CGTGACGGTA TGCTGATCCC TCTCTTACGC 
ACTTGTCCGG CGTTGGCTGC TGTGAAAGAC AACCGAGGCC GTTTGCCTAT CCACGTAGCC 
CTGCATTGGA ACAAAGCCAT GCCGGACGTT CGTGCGTTGT GGGAACACGC CCCCCATACC 
GTTCACGTTC CAGATCCGCT CAAGCCGACT TTACCGTTGG TTGTCCTCGT CACGTTGACT 
GCCCGCAAAC AGAAGATGAA CACCTTGCGC GCGCTGGAGC GACGCAACCC CGCCGTATCG 
TTGGCGGAAT GGTTGGACGC AACGCGCGAT ACCGAAATGT TACAAGGTAC GCTTCAGTGT 
CAGCTGCTGA GTTCGATATA CGACGTGTTG CGGACGTTCC CGCAGGCGTT GCAATCGAAT 
TAGGCTTGTA CAGCGAGTGC TTTGTGCTTG GGGTTTATTC AGCGGACCTT TGTTGTTCGG 
CACGTACACG ATGAGTTGCC ATTGGAAAGT GATTATCCGC CGCAACGGGC CCCAACTAGC 
GTTCCAGCTA GTCCTCTTAG GGTATCGACA CGAGTAGTCC TGCAAAATCC GTGGAGACGG 
CGATCTATTG AAAGCTCCAT CTTGACTTTT ACTTATCCAC AGCTTTCCCC GAGTTAGGAA 
ATCCGTTGAT CGTTGTCTCA GACATTCACT CATATAGAGC TTGGATGAGA CAGTGCTCCC 
TTCCTATCAC TGTGGCAGTT ATCCTGGTGG TCCAAACATC CCC 

 

Protein sequence

MIQAYIDGRQ PYCCPSNPST AASGPIVYEE QQTLSTSSTL AAPYSSQPTT KQTPPTVVRS 
GIPSDHRKGD QEYQIHQIAA ASHTNRSVRD TARLVHRVLQ QQEHRPSSQA PTPLEALPTL 
LYNPRSSSLN EALASASTDT IVISAGPEVA VEDILWMPVS CGMTALHVAA RMLVWVQYVG 
DDDAHQPWNV RFVANVVERQ LAQRQSRLQN VPYPCTTNTA ARNWWRWLVQ QASQTDQARR 
NLVRKRDSGG DSVFDTFWAT WAHPTPSTAG AGRTVTDYGT RPAPPPAPFV ARFPAALDQV 
LASPHHLHLL QICIQRQRQA SIQNITFAMD ETIPDAVYVV ARFWWALTIL LDGARGENVQ 
SSASARESKV ASTPAVLPIV PFLASTGSCP ERLARLVVCL FPEQLSYIVP DTGATVLHLW 
AAAPNPIHEE RDGMLIPLLR TCPALAAVKD NRGRLPIHVA LHWNKAMPDV RALWEHAPHT 
VHVPDPLKPT LPLVVLVTLT ARKQKMNTLR ALERRNPAVS LAEWLDATRD TEMLQASALC 
LGFIQRTFVV RHVHDELPLE SDYPPQRAPT SVPASPLRVS TRVVLQNPWR RRSIESSILT 
FTYPQLSPS