| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47560 |
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| Symbol | |
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| ID | 7202791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | - |
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| Start bp | 114205 |
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| End bp | 115990 |
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| Gene Length | 1786 bp |
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| Protein Length | 390 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002182001 |
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| Protein GI | 219123375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGT GTAAGCCCAC TCTGTTCGGG CTTCGTCAAA AGACTGCGGC GACTGACGAT
GTCAACTCAG CAAACAAAAA CCTTGCCGCG CAAATTCACC AGGCGATTCG CGACGGCGAA
TACGCGTCGC TGTCACGGCT CGTTAAAGAG AAGGAACACC AAGTCTTATG GGAGTCGAAT
TCTTCTGGTT GGACGGCTAT CCATTACGCC GCAAGTCACT TTCTTCCGGC AGAATGGTGG
GTTTGGATTC TCTCACGCGC TGCAGTCACC TCTGGCGATG AGTTCTTTGA CTCGAAAACC
GCACTCGGAG AAACATGCTT TGACATTTTT CTTCGAAGCT ACATTGATCC ACTACCGTGG
CAATCGATTC AAGTAAAAAA CTCTTCCAAA CACTTACTAG AAGCAATTGA TTTCGTCTGT
CAAGACGATC GACTTATTGC CCAGACAAGA AAAGCCATCA AAATGCAAGA ACGGAATCAG
TGCCATAGTG TGCCTCGTTC TTTGGTGACT GGAAATAGGC AAGTTCTCCG GTGTGTTCGA
TTCTGGAGCC GCTTGGATAT TCTTTGCCGT GCTGCGGCAG ATCGAGACTT GGAGTATCCT
CGCAATGAAA CTCTCGTATC TGTGTTAGTC CGGTGCGGCA CGTGTCCTGA ACCCATAGCA
CGGCTTTTAC TAGTACTATA CCCAGAATAT GCTCGAATCA GAACACCAAA GAACTCGCTT
CCATTGCATA CTTGGACCGC ACACTCAAAG AGCGATTTCA CAAGTTTAGA CACTACCGGG
ATGCTGTACT ATTTGATATC GGCCTATCCA CAGGCTGTAA CGTCGTCCGA TGAACAAAGG
CGGCTTCCAT TACAAACGGC GCTTCTTTCA GGAAATCCTT GGTGTTCACT AAGGCCATTG
TTTGAAGCAG CACCAACGGT TCTTGAGCAA CGAGACCCTG TTACCTATCT ACCATGTATC
TGTTTATCAG TTTTGGCACC CCAAAAAAAT GTCGAAGTAC GAGCACGACA AAATATTGCC
GGGAATGGAG GCTTAGACGT TATGTGGAAG ATGTTAACAA AAGAAAAGCA AAAGGCCAGT
AGAGAGCAAG CAAGAGCGCA GCTGGAGCTG GAGCGTCTCG ATCTGATCTA CAACGTGCTG
CTTGCTTTTC CGGGGGCTTT ATGGACATTT TGAACGAAAG ATATTCTACT TCTCTATCTT
TGAGCTACCT CGACTTGACA GTGAGTACTG TCTTCCATTC AAAATTTAAA GGGCTGTCCA
TGGGGATTAG TACATGCTTG TGGTATGCCT CCTCTTGCTA TTGTGGATAG TGAAGTGCTG
TCTTGCTCCG ATAGTATGCA CTACCTATGA TCCCTTCACC GTAAATGCAT GTCTCTCTTT
CCCGATCATC GTCGTTACGA CAGACATTTG AAGACCTCTG CGATGATTTT CTTGAGCAGT
TCCCTTTCCT TTTCCAATTT AAAAGATTCT AACAGTCGAC TAAAGGCCAA CCGCTACAGC
GCATTTGAAA CAAGGCGGCT CTTTTGATCA CGGATATCGA CTTTGTCGCA CAGCTTACAT
ATTGAACGCG ACTCTACAAT CCAATACTTT TGCTGGATCT TTCAGTGAGA GACCTCATTC
ATGTATTTTA TTTTACTGGG AGCGCTATTC GCTTCTGGGG TTGCAGCAGA CGTTTGTCTG
TCCAGTTTAA TCCAAGGACG CAACAACGTG AAGGAGAGAG GCGCGACCTC ATTCAGCGAA
GATACTACTG TTACCAAAGC GGTAATTCTG TCTATTCCTT ACAAGG
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| Protein sequence | MEQCKPTLFG LRQKTAATDD VNSANKNLAA QIHQAIRDGE YASLSRLVKE KEHQVLWESN
SSGWTAIHYA ASHFLPAEWW VWILSRAAVT SGDEFFDSKT ALGETCFDIF LRSYIDPLPW
QSIQVKNSSK HLLEAIDFVC QDDRLIAQTR KAIKMQERNQ CHSVPRSLVT GNRQVLRCVR
FWSRLDILCR AAADRDLEYP RNETLVSVLV RCGTCPEPIA RLLLVLYPEY ARIRTPKNSL
PLHTWTAHSK SDFTSLDTTG MLYYLISAYP QAVTSSDEQR RLPLQTALLS GNPWCSLRPL
FEAAPTVLEQ RDPVTYLPCI CLSVLAPQKN VEVRARQNIA GNGGLDVMWK MLTKEKQKAS
REQARAQLEL ERLDLIYNVL LAFPGALWTF
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