Gene PHATRDRAFT_47538 details

Gene Information

• Locus tag: PHATRDRAFT_47538
• ID: 7202762
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 49938
• End bp: 55136
• Gene Length: 5199 bp
• Protein Length: 731 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002181834
• Protein GI: 219123027

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTGTA CGTATAGCTT GATGCTATTG ATAGTTTGCA GATAGCTTGG TACGTGAAGA 
TATGGTCCTA CCGGAAGTAG AAACCACACC GCTGCTGCAG ATTCGTTTTC TACCCCAAGC 
GTCGGACGAG CTAATTCACC TGGTCCAATC TCGTTTAGCG GAAAACGGCA TTGTCGTCTT 
GTCGAGTCAC AAACTCATGG GAAAATCCAC GATTTTGAGA ATAACGGCCA AGATGGAAAC 
GTTGGAGATA CAGGCTGAAA AGATTCACCT GATGAAGGAA ACGGTTGGCA GTCGTCGCCG 
GGTCGTCGAT TACTTTCGCC GAGAGCACCG CAGTCGGTTT TGCGATCTCA CCAAACCGCC 
CCAACGTGAT GCACAAGGTT TGTTTACGGC TGCTGAGTAT GCACTGTTAA TAAGGCATTT 
GTTGGATCGC GTTCATGTAT TGAAAACAGG GCAAGTTTCA TCTCCCTTGT CCCAATTGTT 
TGACACTAAT TATCGCGTAA AATATTTGGT GGACTTTGAC GACTCAAAAG AGGCTTCGAG 
AGGGAGCTTG GCATTTTTAA CGGCTTCGCT CCGCCGCAAA CTTCACGAAC ATGGAATTCA 
GAGTGCCTGT CTTATGCATG TTCTGATCAC GTACAATTTG GTCGATGCGG TTGTTCCAGT 
GCCGGTTCCT GCCGTAAATC GTGAAATTTT TCGAAAAACG TGGTGGCCCT GGTCTCGTTT 
GGATCTACCT ATTGAATTAA TCCAAGACTA CTACGGTTGG GAAATTGGTT TCTATTTTGC 
CTGGATGGAA TTTTTGACTC GCTGGTTATT CTTCCCTGGT ATCCTCGGTC TGCTGGTATA 
TATCATTCGC TGTTACCGGG GAGATACCAT TGACACGGAT GAATACACTC CTTTTTACGG 
TCTCGTCACC TTTCTCTGGG CCGTATTGTT TTTAAGATTT TGGGAACGCC ACGAACACAG 
GCTCGCCTAT CAGTGGGGTA CTTTCTCGCT GTCGCAATAC GAGCGTCAGA AGTTCTTTGC 
CGTCCGGCCG GAGTTTCGGG GCTACCTACG GAAGTCCCCC GTAACGGGGG AAGTTGAGAC 
ATATTATGAG CCGTTACAAA GAAGAATCAA GTATATTGGA AGTGCGCTTG TAACTTCGGT 
TATGCTGGCG GTTGCCTTTT CTGTCATGAT ATTGTCTCTC AATTTACAAG GCTACATTCG 
CCCGAAGTCA AACCCCACTC GTTGGACCAA AAACAGTCCA CATCCTTTCT TCATTGCTGA 
TTTGGCATTC GTGTCCGAAC CGGGCCAAGT CTTCGACGCC TTGTCTCTAC GCGGCTATAT 
TCCGGTAGTC GGGCACGTGA TATGTATTTT CTCTTTGAAC TTGCTGTACC GTCGAATAGC 
CGAACGATTG ACAAGCTGGG AAAACCACGA AACGGAGAGT AGTCACCGTA ACTCACTCAT 
TCTCAAGCGA TTCCTGTTTG AGGCCTTCGA CTGCTACGTC GCACTCTTCT ATTTGGCGTT 
CTATGAGCGG GACGTTGAGC GCCTCCGTCT AGAGCTGATT GCTGTTTTCC AGATTGATAC 
AATCCGGCGC GTTTTGCTAG AGTGCGTTAT CCCCATACTG ATCCAGCGAT TCAATGCGGC 
GCATCACTTG AAACGAAAGC TGAATCCTAT GCAGTCCCTC CTGGTGATTC CCACCCACGA 
CATATTAATG GACGAACTCG ATAAGGATAC CTACGATCAG TTTGATGATT ATATGGAGAT 
TGTAATTCAG CTCGGATACG TCACCTTGTT TGCGTCAGCC TATCCGTTGG CATCCTTAAT 
TAGCATCGCA GCTAATTGGG TGGAGATTCG TTCCGATTGT TTCAAGCTAA CCCAGGGTTG 
TCAACGACCA GCTGTCTTTC GATCTTCTGG TTCGGGTATG TGGAAAACCT TGGCATCTTG 
TATCATTTGG ACGAGCGCCT TGACGAATTG TCTCATCGCG GGTTTCACAT CTGACCAGTT 
GGTGCACTAC CTGCCTTCAT TTTACGTTCA TGTGCAGGAG GGCTATACAG ATATGGGTCA 
CGAAAAGGGT TGGTTGCTTG TGTTTTTGAT TTTTGGACTC GAGCGGATCC TGGTTTTAAC 
CGGCTTGCTC GTGTATGCGA TTGTGCCAGC CGTACCAGAA GATGTAGTCG ATGAGCTAGA 
GCGGCGTCAG TACATTCGAT CGCAGCAGGA AGCGTGGGAG CATTCACCCG AGAACAAAAA 
GAACGACTAA GAAATTTGAA GTAATCTTTT TATTCTCTTA AACAACGAGA TCGATTGGCT 
GTGAATTGCA CGTTTGATAA TATATTAGAG CGGGCGGAGG TGTCTAAAGT TTACCAGGAA 
TCCGTATCGC CGTAGTTGAT GACGATGCAG TGTCTTCTGC AGTCGTTGAT ACTGCTCCTA 
CCGCAGGTTG TTGTACTAGC CCGTACAAGA GCACGGAACC AGCTTCTCCC CGTTCAATAG 
CAATGGATCC GACAGCCAAC GTGAAATTAC TGGCCATGGC AATTGCGACA CCGAAATCGT 
CACCAGGCCT TTCTCCGGTC CAAGATACAG AATGCACTTG CCATAATGAA GAAACATCAG 
TGGTGTTTAT TGTGCTGGTG CTGGGTGGGT ATCGGTACAA GCGAACCTCC CCAACTTTGC 
TGTTGGCACC GGGAACTCCC ACTGCCAACA AACCTTGACT TAAAGACACA GCAGAACCAG 
CTTCATCGTT GGCCGTGGGC GTTTCCTGGA CAATAGGATC ACCTAAAGCG TTCCAACCAT 
TGGAGGCTTG GTTATACTCG TACACTACCG TCATGCCAGC ATTACGTTGA CCGTTGACGG 
TCTTCCACGG AATGCCCACG GCAACACGGA ACGTCGCTGT ATCTCCGCCG ATGTCTCCGA 
CGGTGGTAAG GGCGATGGAA GCGCCGTAGC GATTGTCGGA AGAAGAGGGT ACAAAATCGC 
TGTTGACCAT GTCGAGGGGG CCGCCAAGTA CTGTCCAGGT TTGCGTGGAG GTGTCCCATT 
GCCAGGCCCG GACATAGCCA GTGCTACCGG TGTTCCGAGG GGCACTAGCA ATCACTACGC 
TTCCATCCGG CGAAAGATCA ACAGCAGAGC CCAACCAATC CAGATCTCCT GTCCCGGTCA 
AAGGCGCACC GCTTCCCATC ATTTGCCATA CATTGCCGGA CGGGCTGTAT TCGTACACCC 
CGACGTGTCC GGCGAACCGA AATTCCGGTG TAGAAAAGTA AGGTGCACCA ATTGCCACAC 
GAAGACCGTT TTGCGACAAA GCTACACCCA CACCAGCGTA AGACATGGAA GAGAGTCCTA 
TGATGCGGTT TCCCCTTCGC GCGTACTGGC CCGTCGCTTC GTTATAAAGG TATATTTGGA 
TACCGCCTGC TTGCTCGCCA CCCGAGTCGT CGTTCGGTTC CGAAACAGCC AAAATGGATC 
CATCCGCATT GAGCGCCACG GCTGAACCCA GGGCATCCTG GGCCGCGTCT CCCCGAAGAG 
CGCTACCTCT TGGTATCCAC TGGTCCTGAA CTCGTTGGTA TACCTGTACA AATCCAGCAC 
GAGCCAACAC GCCGGCCGCA CTGTCACTGT TGGCCACGTC CGGAGCGCCA ACAGCCACAA 
CTTTACCGTC ACGCGACAAA GCCAATGCTT GTCCAAACAT ACCGTTCGGT GCCGGACCCG 
TCAGTCTACC CAAGGGTGAC AATTGCAAAT TTTCTAAAGC TTGCGTAGGC GTTGCGGTGG 
GAGCAGACGT CGTGGAAAGC GCGGAGGGTG CGATGGAGGG CTGTGCCGTA GACGAGACAG 
TCGTGGGACG AACAGTCGGC CTGTTGGTTG GGGCGCCAGT ATCCGACGCT GCTGTAGGAG 
TATCGTCTGT ACCGGCAGCA ACGTCGATCA CAGAAGGGGC TTGGGTCCCT CGCACGTACC 
GAGTTGGCGC TGCGGTGGTG CCAGCCGCCA ACGCAATCGC TGGAGACGCC GTGGGTTCCG 
TTGTCTGTAT ATTGGACCAA GAGTCGCCAC TAAGATTCGT TTGCGACGCA TCATCTCCCG 
GGTCATTACT GTTTCTGGTG AATCCCGTCG TGACCGAAAC AATCATGGTC GCGATGGCCA 
GGAGGAGTAT CAAGAGCAAG GCGTACGCTA ACTTTCCTTG TTTAGAGCGA AGGTTGAAGA 
AACCGTAACA GCACGCGTAT GAGTTGGTGC TCTGTCGGTG CGACGTCCCG AAGCCTTCGG 
CCGCGCTGTC GTCGCTCCCG CGGGCAGTGG GGCTAACTTC GTGAATTGAG CCCAATGCAC 
CGAAATTGTA GTTGGAAGTG GCCTCGTCGC TGTCGTAAAT GGTAGCGTGA TAGGGTGGAT 
GTGGGTGCGA TCGCATTTTG CGACTATTGT TGCTAATGAC GGGAGTATGC TCGGAAGCGG 
CGTTGGAAAC CGTGGAAGCC CCATCGTCTA GAGTCGGTAA AGTGTCGTTG TCGTCGTCGG 
TGTCATCGCC ATTGCAGGGT GCCGATTCGA CTTCGAAAGA CAGTTTGTGC GTATCGGGTA 
TGACGGCTTG GGCCGCCGCA TCCCCGTAGG CATCGACATC CACGGGTCCC GTGATGCCAC 
CATCCGCCTC AGAGCTGTTG AGGACAGCGT TAATGATAAA CTGCTCGTGT GGACTGGTGC 
CAACGTCGGC GGTATGGTCG TACTCGGGAC TGTGTATACC GACATCTCGT TCGTAGGGTA 
TCCGCTCGCG ACCTTCCTGC CCGTGACGCT GTTGTTGCTG ACGATAGCGA GCCAGCCACC 
AAGCGGAGGC GATTCGTTCG TGTTGTTGCG ATTGCCGCGG TGACGTGGAG AAGTGTGCTG 
TTGGTATCGG TCATGCTGCG GATGCGGCTA GTCGGCGAAG CGTTACCCGT GTCCGCGGAC 
GACTCCACGC TGGTGTTTCC GTGCGGAGCG TGTCGGTCAC CATCCCTTTC GTCGTCGTCG 
TCTCCGCTAC TGCCGCTCTC CACGCGCTGT CGGTAGAGAT CTCCGGGATG ACCTCCGGTG 
CGGAAGAAGG GATTGGACGG TGTAAAGGAG GAAGTGGTGG TGTTGGCGGC GGCGGCGGTT 
GTTGGAGGCG TCGCGGTAGC CAGAGGAAGA GGTGCAGGAG TCGTATCCGC GGTCGCGGCA 
ACTCCGCGAT CTTCCTGTGG ACGGGCACGG CGCGAACGCA GGATCGAGGG ACGGCGAGGT 
GGTGCCATGG TGCCAAAATG TTGCAATGGG ATACAGCAA 

 

Protein sequence

MDYSLVREDM VLPEVETTPL LQIRFLPQAS DELIHLVQSR LAENGIVVLS SHKLMGKSTI 
LRITAKMETL EIQAEKIHLM KETVGSRRRV VDYFRREHRS RFCDLTKPPQ RDAQGLFTAA 
EYALLIRHLL DRVHVLKTGQ VSSPLSQLFD TNYRVKYLVD FDDSKEASRG SLAFLTASLR 
RKLHEHGIQS ACLMHVLITY NLVDAVVPVP VPAVNREIFR KTWWPWSRLD LPIELIQDYY 
GWEIGFYFAW MEFLTRWLFF PGILGLLVYI IRCYRGDTID TDEYTPFYGL VTFLWAVLFL 
RFWERHEHRL AYQWGTFSLS QYERQKFFAV RPEFRGYLRK SPVTGEVETY YEPLQRRIKY 
IGSALVTSVM LAVAFSVMIL SLNLQGYIRP KSNPTRWTKN SPHPFFIADL AFVSEPGQVF 
DALSLRGYIP VVGHVICIFS LNLLYRRIAE RLTSWENHET ESSHRNSLIL KRFLFEAFDC 
YVALFYLAFY ERDVERLRLE LIAVFQIDTI RRVLLECVIP ILIQRFNAAH HLKRKLNPMQ 
SLLVIPTHDI LMDELDKDTY DQFDDYMEIV IQLGYVTLFA SAYPLASLIS IAANWVEIRS 
DCFKLTQGCQ RPAVFRSSGS GMWKTLASCI IWTSALTNCL IAGFTSDQLV HYLPSFYVHV 
QEGYTDMGHE KGWLLVFLIF GLERILVLTG LLVYAIVPAV PEDVVDELER RQYIRSQQEA 
WEHSPENKKN D