Gene PHATRDRAFT_38045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_38045 
Symbol 
ID7202739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand- 
Start bp743788 
End bp744351 
Gene Length564 bp 
Protein Length187 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182125 
Protein GI219123629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.160362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTAG GACGCGGAGA GAACACCCGA TCGCAGTACT TGGAGTACAT CGATCGTGGT 
TCTGTCACTC CGGAAACATT TACGTCGGCA CCAACGCTCG CGCCAATCGC CGTGACTGTG 
GAAAGCACCA ATATGGTAGT AGTGGGTTTC TTGATTGGAT TGATCATTCT CCTCTCGATA 
TTGTTTCTTA TCATGTCAGC GCCCCCGATT ATGCGGTATA TTCAACGGAG GAGAGAAGCT 
GATCCGAAAC GGATCGAACT TCGCTACGCA ACGATAGAAA AATGGCTCAT CAGCAAACGC 
GTTCTGGCTC ATTCGGAAAA TTGCGAGATA TTCAGTTGCA CCCGCTCGCA TGAAACTAAA 
GGCAGCAATA ACCACCTGAA GCCAATGGAT TCCTGCGACA CTGTGGAAAC AGATGACGAA 
AGTTCTTGTA GAGTCGGAAG AGAATGTCCG ATTTGCATGG AGGAATTTCT TGTCGACGAT 
GTGGTCTCCT GGTCACCTTG TCTACAAGGA ACGTGTAGTC ATGTTTTCCA CCATCGATGC 
ATCAAGGTAT GGGAATATAT CTAG
 
Protein sequence
MEVGRGENTR SQYLEYIDRG SVTPETFTSA PTLAPIAVTV ESTNMVVVGF LIGLIILLSI 
LFLIMSAPPI MRYIQRRREA DPKRIELRYA TIEKWLISKR VLAHSENCEI FSCTRSHETK 
GSNNHLKPMD SCDTVETDDE SSCRVGRECP ICMEEFLVDD VVSWSPCLQG TCSHVFHHRC 
IKVWEYI