Gene PHATRDRAFT_37959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37959 
Symbol 
ID7202876 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp513514 
End bp514680 
Gene Length1167 bp 
Protein Length311 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182081 
Protein GI219123541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTC CGGTCTCGGC CTTTGTGGGG AACACGGCCT TTGCGCGAAC AACGAACCTA 
CATATGGCTG GCATTGCCGA CGAAGTTGAT GAGTCGATTG GTATCGATGC CATTCGACGT
GCTGTACGTA AAGATTTCTT TGTGAATGTG GACAAATACG ACGCTATTCG CGACTGCCTG
TAGGACGGTG TTGACGAGAA CACACTGTTT TGCTTCGCGA AGCGCCATGT CGTTCGATTA
CTCACGGTCG GGATTTCTCC GCTCTTTCAT TAAACAGATC AATTACCAAC CAGGCGCAGC
CTCCACCGAA TTTGGTCGTA AATACAAGCA CTTGGTGGGT GCCAAAATCA AGACAGTCGG
CGAAGCCTTT GCTGATTTCA GCAGCGAACT CGGGGTCACT GTCAATCCCT TGTACAAGAA
CATGGTTACG GATATTGTCG GTACCACGCA CCTGGTTATT GTCAATGCTC GTTTCCAACG
CGATGCGATC TGGTCTCTGG GAATTTTGAC CGCTCTGGAC TTGTTGCTCA AGAATTACCC
CGAACCCGAA GTCGGCGCCA AGATTGTGTC GGCCTTGTTC AAATCCGTCG GCTTGGACGA
GGACGAAATC CGCAACGAAG CAAGAACGAT TTCCGATTGG GCCGTGGGCA AGAGCAAGGC
GGACATTGAA ACCGCCTTGA CTGGAGAAGG AGATTCTCCC GTCGCGGCGA TTGCCAACAG
CATCAAACCA AACGACTACT GGATGTACAG CCGGTACTTT GGCATTGGCC TCATCAAGAT
CATGGAATCG ACCGGCGTGG AAATGGACAA GGATGAAGTC TACCCCGTTA TGGAGAGCTG
GATGCAAGAG AAATTGGGGC GATCGTCTCT GACGGCATGC GTAAGTAGCT CTTCACTAAG
ATCCGTACTT GCGTCGGTCG ATGACATTAT TCTGACATTG TTTTTCCCGA TGAATAGGCT
GACAGCGATT TGTACTTTAA GATCAAAGAT AAGCTTGACA TGATGGAGAC CATGATGAAG
GAGATCGAGA TTCGTGAAAA GAAGCGCATG GCTGAGCGAC TTGAAGACAA GGCCGAGGCC
GCACTGCGTG CTGCCGATCG GGAAGTCAAG ATGCAAGCCG AAATCGAAGC CGAAGCAGCC
GCTTCGCGCG AAAAGACCGA GGTATAA
 
Protein sequence
MATPVSAFVG NTAFARTTNL HMAGIADEVD ESIGIDAIRR AINYQPGAAS TEFGRKYKHL 
VGAKIKTVGE AFADFSSELG VTVNPLYKNM VTDIVGTTHL VIVNARFQRD AIWSLGILTA
LDLLLKNYPE PEVGAKIVSA LFKSVGLDED EIRNEARTIS DWAVGKSKAD IETALTGEGD
SPVAAIANSI KPNDYWMYSR YFGIGLIKIM ESTGVEMDKD EVYPVMESWM QEKLGRSSLT
ACADSDLYFK IKDKLDMMET MMKEIEIREK KRMAERLEDK AEAALRAADR EVKMQAEIEA
EAAASREKTE V