| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_37941 |
|---|
| Symbol | |
|---|
| ID | 7202858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 473737 |
|---|
| End bp | 474906 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002182072 |
|---|
| Protein GI | 219123522 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.149432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT GGAGACGGGT TTATGCATCC TTGTGCGTCG CGGTAGCTAC TACGGTGGTG
CTTTCCGCTC TCTCTAGGGA TGTCCGCTCG ACCCTCATGC CGTTCTACAA TGAAACCCAG
AAGACGTCGC TACTTTTTGA TGACAGCAGT GATCGCGTTG GGCATTTCGA TGGGCTATTT
TCGGATGCCC GGGCTTATCA AAACATTGAG GAGTCAAATC AACACAGACA AAAATATGAA
GCGAAGTGCG CAGACGAAAG CTCAACCCAA GAGGAGATAG TTGAAATTTT GGGTAGTTGG
TATAGGCCAA GTCTTGATGG AGAAGTCGCA ACTCAACAGT CCAAGCTGCC GGTTGAACCG
TGCCGGTTTA CCTTTCTAGA TTTTGGCGCC AATGTTGGAG ATTCGATGGG CAAACTAGTG
GACGCTGGCA TTCCACCTTG TTCGAAGAAA GGCATTTTAG CTCCACGAAT AGATCTGGAA
CATGGATTTC TACAACCTCT TCAAAAGGGA AAGGGTTTTA GAAAACTCAT CACCTGGATA
CGTACTCAAA TGGAGGAGGT GAGCCGGCAA CTTTCGGGCC CGGTTCAACC AGAGAATTAT
TGTTACTTTG GTATCGAGGG AAATCCAATC TTTACAAATC ATCTCAATAG ATTACAGCAA
CGTCTCATGC TTACTTCGCC GAGACCACTT CGAAGAGTCC ACTTCTTCAC CGAGACGGTG
GGCGCTGCAA AAGACGAGAC TACGGTTCTG TTCTTGGACA CAGTCAATGA GAAAGAGAAT
TTTTGGGGTT CGTCTACACT CTCTGGACAT AGGGATGTTC AAAGCTCCCT CTTGAGTGGG
AATGACAAGC GTGAGGTGTC TGTGCAAGGT TTCACTTTGA CTCGCCTTCT TCACGAAACA
GTCAAGATGA TGCCTGGTGC ACATGTTATG GTGAAAATGG ATATAGAGGG TGCCGAGTAT
GCATTGCTCA ATGAAGCATT TGACTCGGGT GCACTGTGCA ACACGACTGC TCGTGCTGTC
AGGGTCGATA TAATTGTTGA AGTTCACGGC GAGGTGAGTG AAAATCGTTC GTATATGAAT
AGATATCCTA TTTCTACTCG AAGTCACATT CTCTCTGTAG ACCTTAATAG GAAGAAACTT
ACACGCCGAT AGATTCAGAA GCAAAGTTAA
|
|---|
| Protein sequence | MRKWRRVYAS LCVAVATTVV LSALSRDVRS TLMPFYNETQ KTSLLFDDSS DRVGHFDGLF
SDARAYQNIE ESNQHRQKYE AKCADESSTQ EEIVEILGSW YRPSLDGEVA TQQSKLPVEP
CRFTFLDFGA NVGDSMGKLV DAGIPPCSKK GILAPRIDLE HGFLQPLQKG KGFRKLITWI
RTQMEEVSRQ LSGPVQPENY CYFGIEGNPI FTNHLNRLQQ RLMLTSPRPL RRVHFFTETV
GAAKDETTVL FLDTVNEKEN FWGSSTLSGH RDVQSSLLSG NDKREVSVQG FTLTRLLHET
VKMMPGAHVM VKMDIEGAEY ALLNEAFDSG ALCNTTARAV RVDIIVEVHG EIQKQS
|
|---|
| |