Gene PHATRDRAFT_37932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37932 
Symbol 
ID7202853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp441817 
End bp443322 
Gene Length1506 bp 
Protein Length501 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182068 
Protein GI219123514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGCA CATCTCCGAC CCCGACCAGG CTATCGTCTT CGCCCTCCAT CGTACCTTCC 
GTCATGCCAA CCGCAACGTG TCACGACGTC CAATCGTACC GCAGCCCTAT CAACAACTTA
GAATGCAGCG ACCATAAAGG CACGGACTGT ATTCAGTGGC GGCACTTGGG TTTGAATGTA
AACGAATTGG AAGACCTCGT CAATTTTTGC CCGGAGTCGT GCAATATTGA TTGTGGTGCT
CTAAGTCGCT TTGAACTTCG CTTGACCTAT CGTTTGGAAA ATGTAATAAC ATTTTTGGGT
CCGGAAACAA GTGAAACGAT AGAATTGGTT GGAGTGGAAT TTTTCACGAA ATACATCCAG
TCTATTACCC CTCAAAGCCG CATTTTTGTG AATGAAGCAG AGCTCTTGCG ACAGCAGATC
GAGCCGTATT TTCTAGGGCA GCGTGAACAT GCCCTTCGTA CTTCACAATC AGGCCCTTAC
GTGGAGCTTC TGATAGAAAC GATGTTTCGT GGACTCACGG TGCACTTGAC GACGGATGCT
CTGTTGGGGT ACCTTGAAGA AGCGATTTTG AGCACGGGCT TTACACAGGC GATTCAAGGA
TCCGGTGATC CAACCTTGAC GCAAGCGATA GTTTCTGACC ACAAAAAAGG ACGGCGCTTT
TCTCCGAACG CAGGATCAAC GGCAGGCAAT GATGACAATA GGCATGCGTC GGGAAGCGTT
GTTGCTTCCA TGCTTATGGC CTTCGCCGCG ATATGTGCAG GAGTATGTCT TTTCGTTTGG
CACAAACGAA AAGTCCGAAC GGAAAACGGA GATCGAGGTG TGAATGAGCC TAGTGCTGTT
AGCCCCACTG AATCAGAGCG ATCCCAATTA GCCAACATAT TTTCTTTCGA AAGCGTCTCG
AACGCGGTTG CCAATGCTAA GGGAGCAGTA CTAAATGTCA ATTTCTGTCA TCAAAAAAAG
AATTCGACAA AGAATACCCC TAGCAGGTCT TCTACTAGTG AATCAGGCAG TGGCGAGACG
GAAGACGAAC CGCACCCGTT GGCAGGCCTT ATTCCTCCGA TGATTGTCAT GAATCAAATT
GACAGCAATG AAGATTCCAT CAGAGGCTCC AGAAATGCAG AAAAAATAGC CAATGTTGTA
CCATCACACT ACATGGCCGC TTCTGCACAG CTTATAGCCT CGCTGAATGA CCGGAGGACG
CCGCACCAAG TGCCGAACTT CTCTAAAGTA TTTGTCAGTG TAGCGGACTT CAACGCAAAA
GAGAATGAAG GCGATCTTGA GAAGCAAGTG GCCTGGTTCA TTGCCCCGAA TAAAGGGAAC
ACGAGCTTTC ATATCTTTTC AAGCGAAGAC AATGACGATG AAGACATTGA CGGGATTGAT
TCTGTATCGT CTTATCCTGC AGAAGCAAGT GGAATTGAGA GCCCTAGTAT ACGGCAAACA
ATGGACGATG GTACTGCCTT TCGAAAACTG ATACCATCAG CATCACCCGT GGCAAGCCTA
AAATAA
 
Protein sequence
MNGTSPTPTR LSSSPSIVPS VMPTATCHDV QSYRSPINNL ECSDHKGTDC IQWRHLGLNV 
NELEDLVNFC PESCNIDCGA LSRFELRLTY RLENVITFLG PETSETIELV GVEFFTKYIQ
SITPQSRIFV NEAELLRQQI EPYFLGQREH ALRTSQSGPY VELLIETMFR GLTVHLTTDA
LLGYLEEAIL STGFTQAIQG SGDPTLTQAI VSDHKKGRRF SPNAGSTAGN DDNRHASGSV
VASMLMAFAA ICAGVCLFVW HKRKVRTENG DRGVNEPSAV SPTESERSQL ANIFSFESVS
NAVANAKGAV LNVNFCHQKK NSTKNTPSRS STSESGSGET EDEPHPLAGL IPPMIVMNQI
DSNEDSIRGS RNAEKIANVV PSHYMAASAQ LIASLNDRRT PHQVPNFSKV FVSVADFNAK
ENEGDLEKQV AWFIAPNKGN TSFHIFSSED NDDEDIDGID SVSSYPAEAS GIESPSIRQT
MDDGTAFRKL IPSASPVASL K