Gene PHATRDRAFT_37922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37922 
Symbol 
ID7202687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand- 
Start bp412583 
End bp413140 
Gene Length558 bp 
Protein Length185 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182063 
Protein GI219123503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00476754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTG GATCTCTGCC GCTATCAGCG TTTGTTCCTC CTCCGCCCCC CAGTGCCATC 
AGCTTCCCAG TCAACCGACA TATGGTTAAG ACAGAGCATA TTATTAGTGA ACTGGGCTTG 
ACATTGCCAC CCGCACCTAC AGCGGCTGCG AATTATCAGC CGTGCCAGCG CGTTGACAAC 
GTCTTGTACC TCTCTGGTCA TTTGCCGCTT CGTGACGATG GAACGCTTCA TACGGGAACT 
CTTGGAAAAG ATTATGATGT ACAAGCTGGC TACCAAGCAG CTCGGCAGGT TGGATTGAAT 
CTCATCGCAT CTTTGAAACA CGAATTGGGA GATCTCGACA GAGTTGAGAA GATTGTGAAA 
CTTTTCGGAA TCGTCCAGTC CACAGATGAT TTCCATGAAC AGCACAAGGT AGTCAATGGA 
TGTTCTGATC TATTTTGTGA AGTATTTGGG AAAGAGCGAG GGATGCACGC ACGATCAGCG 
ATTGGTACAA ACGCCTTGCC CCTCGGAATC GCCGTCGAGA TTGAAGCCAT AGTTCTAGTG 
AGAGACACTT CAACTTAG
 
Protein sequence
MQVGSLPLSA FVPPPPPSAI SFPVNRHMVK TEHIISELGL TLPPAPTAAA NYQPCQRVDN 
VLYLSGHLPL RDDGTLHTGT LGKDYDVQAG YQAARQVGLN LIASLKHELG DLDRVEKIVK 
LFGIVQSTDD FHEQHKVVNG CSDLFCEVFG KERGMHARSA IGTNALPLGI AVEIEAIVLV 
RDTST