Gene PHATRDRAFT_37889 details

Gene Information

• Locus tag: PHATRDRAFT_37889
• ID: 7202673
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 330384
• End bp: 331039
• Gene Length: 656 bp
• Protein Length: 191 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002181884
• Protein GI: 219123131

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.392899
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCCAG TGGCGAAAGA TCATACGCAA GAAATTCCTA GCGCAGGACG GCGGTCTCTA 
GTAGGATCGA GCGCTTCCTT CCGGGATGAG GGATCTCAAG CATTTCGCTA CAATGATGGC 
GACGAAGACG ATCAAAGCTT AAAGGATGAC GAAGCTGATT TCATCAATCG ACTTTTTACA 
ACTGTTGACG CACCGTGCCG AGGCGTTTCC ATGTGCCACA CAAGCTTTGA GGACAAGCTC 
GACCTTTTTT CGGTACGTGC AGCAATTCTA ACTTGCTGAT CACTATGTTG ACGACTCACA 
GGAATAATAT CTTGTTGCTC TATGCGTTGA AGCACTGCCG GCAACCGCTT GATTTCTGGT 
CATTTCTTCG TAAACACAAT ACTCATAACG GGACGGGTGT TGAGATGATG CCCGCTGGTA 
CCTACGTCGT TCCCACTTTT TGTGAGTATT GCGGGGCCTC CCATACTTCG CAATGTAAGC 
CCAACTGTGG TCGCCCTCCT TTATTTTTTG CGAAAAAGCG ACCGCCATTC CAAAAACCAG 
ACTCGAAACG GTGGAATTCC GAAACAGACG AGGAGATTGC CCCTCAAGTG TCACGCAGTG 
TTCAAACAAC TAAGAGCTGG GTAGCAGGTT TGTTTGGAGG GAAAGGAGCC AGCTGA 

 

Protein sequence

MDPVAKDHTQ EIPSAGRRSL VGSSASFRDE GSQAFRYNDG DEDDQSLKDD EADFINRLFT 
TVDAPCRGVS MCHTSFEDKL DLFSHCRQPL DFWSFLRKHN THNGTGVEMM PAGTYVVPTF 
CEYCGASHTS QCKPNCGRPP LFFAKKRPPF QKPDSKRWNS ETDEEIAPQV SRSVQTTKSW 
VAGLFGGKGA S