Gene PHATRDRAFT_37885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37885 
Symbol 
ID7202670 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp320964 
End bp322187 
Gene Length1224 bp 
Protein Length365 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181883 
Protein GI219123129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.51003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCG CCCGTAATCG ATCGCTCCTG AGATTCTTTG GAACACTTCT TGCACGGGAG 
CCGGGATGCT GTCAGCGAGA GAACCGGAGA AATTTCTCGA AGTCGCTAGC ACGACGAGGA
AGCGAAACGG TACTTATTCT CGTTCCAATA TATCCAATTT TCAACGATTC TACGCCGAAG
TGCCCACGAG CGCAGTTGGT ACAATCGGCA TTCATCCCTC CAACCGTAAG TAAAATACTA
ATCATTCAAA ATTTAAATGT TACAACACTC TACATTCATG CCCCACCAGC CCACATATGT
GAACCCCTTG AACAGGAAAA TATGCGACCG GAACAATGAG GAATATTGTG GGGCGCTCGA
TCTACTCTCC GTGGACGAGT TTGCTCTGGA GTCCTGGACA ATCGCGGAGG CCGCAGACGG
AATCATGTCC TTACGCGGTC GCTTGATTAT CGACCAGATT AAACGAGCCG TGTCGAGCTA
TTTCTCGTTG CCGGTGCCAC CCTACGGGAA TCCGAGTTAT TGGGAGGGCT GCTACCGATC
GCTCGGCCCG AACGACAGTT TTGAATGGGG TCATATTTCG TTCGAAGATT TACATAGATA
TCAATATCGT GAGCTCCGTT ACGACCCCGT GATCCGTTCA GATGCGACAA AACCCCAAGA
TCCACATATC CAAACAACTT TCGGAGACAC GCTCCGTGCC TATCCACATT CCCCATCCGA
TGAACACATC CTAATTCTTG GATGCGGAAA CTCCAAATTT GGTGAAAGCA TGGTAGAACA
CGGATGGAAT GGACCGATTG TGCAAGTTGA CGTCGCCTCC CGTGTCATTG AATCAATGAG
TCAGCGATGT CAGGAGCAAC AAAGAAAGGG AGACATGTTG TTTGTTCAAG ATGATGCCAC
CGTTCTGTCA GCCTTTCATG ACGACAAGGC CACTGCGGTT TTTGACAAAG GCCTCCTTGA
TGCTTTATTT TGTGCCGATG AGTACCAGCA GTGTTTTGAT ATCATGAGCT CCATTCATAG
GGTACTCCAA CCAGGCGGGG TTTACGCCTT TCTGTCATTT TCGCGACCAC AGTTTTTAAT
GGACAAGATA CTGTTACCGC CCGGCCACGA GAAAAGAAAA GGGCCGGTCC GTAATTGGGC
CAACATACAA ATACGGCAAC TAGATACTAT CCTATTATAC CGCTTTCAAA AGGCCATGCC
AGAGACGGTG CGCAAACCAA ATAG
 
Protein sequence
MSRARNRSLL RFFGTLLARE PGCCQRENRR NFSKSLARRG SETVLILVPI YPIFNDSTPK 
CPRAQLVQSA FIPPTPTYVN PLNRKICDRN NEEYCGALDL LSVDEFALES WTIAEAADGI
MSLRGRLIID QIKRAVSSYF SLPVPPYGNP SYWEGCYRSL GPNDSFEWGH ISFEDLHRYQ
YRELRYDPVI RSDATKPQDP HIQTTFGDTL RAYPHSPSDE HILILGCGNS KFGESMVEHG
WNGPIVQVDV ASRVIESMSQ RCQEQQRKGD MLFVQDDATV LSAFHDDKAT AVFDKGLLDA
LFCADEYQQC FDIMSSIHRV LQPGGVYAFL SFSRPQFLMD KILLPPGHEK RKGPVRHARD
GAQTK