| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_37769 |
|---|
| Symbol | |
|---|
| ID | 7202772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011682 |
|---|
| Strand | - |
|---|
| Start bp | 28486 |
|---|
| End bp | 29357 |
|---|
| Gene Length | 872 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181986 |
|---|
| Protein GI | 219123344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAGA CCGCACTAGG CAACCCAGAA CCTCTCCCGT GCTCGGTTCA AACAAAGCAA
GCAGAGGGGG ACGGGTAAAA AGTAACAGCA CCTTTCATAT GATGCACAAG TTACTATACT
GACCGGGTCA CTCGTTAGCT ATGAGCAAAG GGCTTTAATG TTTTTCCAGG TTGCCTTGGG
CCTTTCTGTT ACTCGGTGCC GTTCCTTTTA CCCTTGTCAA TTCCTTCGTC GCTGTACACC
ACCCGCAAAG CTTGCTCGCC AGGATCGGAT GTAGCGATTC TGCTAATTTT GTATGCGTCA
ATCCTCATAG GAACCATTTT GGAGCGTCTG CGTTGCCATT CACCTTGCCG ACAACGATTT
CGAGTACCGT CTTGCGCTAC AATGCGTACG ACGACTGGCG ATCCGATGCC GTTGTCCCTA
CCGTGACCTT GACGGAAGAG AATATTCAGG AATGCCTCGA AACTCTGGTT CAGAGCAATT
ACGGACAAAC AATGTTTGGT TGCCACGAAC GGCCAGCTTC GGTTGGCATT ACTGGTCGCG
TAGAATTGGT AGAGCTGCAG GGTCCCGAGG TTGTACTCCG ATTGGAAGGT TCCTTTTGGC
ATCGACGCGA AACCGTCTTG GGGAGAGCTG CGGTATGGTT AAATGCCTGT ATGCCAGAAC
TGATCCAAGT GCGTGTGGAT GATCTAGAAG AATTGGAAGA TTTTGAAGAC GTTCGGGACG
AATTCACCGG AGAGCTCTTG GCCGTACGAG ACAAACGAGC TCCAGATTTC AACGGGGATC
GGCAAACCAT GGAATACCAA GGTATTGATC CGGACGTGCG TGGACCGTTT CCCCCCGGCG
TCGGTGGCGC CTTTACCATT AATCCAGCAT AA
|
|---|
| Protein sequence | MSETALGNPE PLPCSVQTKQ AEGDGLPWAF LLLGAVPFTL VNSFVAVHHP QSLLARIGCS
DSANFVCVNP HRNHFGASAL PFTLPTTISS TVLRYNAYDD WRSDAVVPTV TLTEENIQEC
LETLVQSNYG QTMFGCHERP ASVGITGRVE LVELQGPEVV LRLEGSFWHR RETVLGRAAV
WLNACMPELI QVRVDDLEEL EDFEDVRDEF TGELLAVRDK RAPDFNGDRQ TMEYQGIDPD
VRGPFPPGVG GAFTINPA
|
|---|
| |