Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_3425 |
Symbol | |
ID | 7202896 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 616520 |
End bp | 617869 |
Gene Length | 1350 bp |
Protein Length | 394 aa |
Translation table | |
GC content | 55% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182101 |
Protein GI | 219123581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.954409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGGGTTGTCT TGGCCTTGTC GGGTGGGGTC GACTCGGCCG TGGCGGCGGC TCTTTTACAG GAAACCTACG GCAGCAGCAA CAATTCCGAC ATTGGTAGCG CGGTACTACA AACCGTGCAC ATGTCCAACT GGAATTCCAA TACACAAGAC GACGATTCCA TCGCGTCGTG TACGTCGGAA CAGGATTGGA AGGATGCGAC GGCGGTCGCG GAGCACTTGC GACTCAACCT GACACGACAG CACTTTGAAC GTGAGTACTG GAATCAAGTC TTTGAACCGT ACGTGAACGA TATTTTACGG GGAACTATGG GCAATCCCGA CATTGGCTGT AACGTGCACG TCAAATTTGG TGCCTTGCGC GAGTTTGTCC GGCGAAGGTA CGGAAGGCAC CGACCACAAT CCGGAGCTCA TACTCCAGGA GGAACCGAGC CACTGTTGGC GACGGGACAC TACGCTCGCC TCTGGCATCG GAATCGGGCT GATTCTGCCA TGCCGTTGTA CGTGGAAGAA GCACTAGCCA CACATCATGA CGAGGCCGAC TGGGTATTGC GTTGGGGATG GGACCAGCCT CCATCGCCGC ACTACTCGCA CCACAATCAT CAGTACCAGA CGCCTCCTCC CTTGCTATTA GCCGCCGCGG ATCCCAGCAA AGATCAATCC TACTTTTTGT CAGCCTGTGC CGGATACCAG CTATCAAACG TGCTCTTTCC TCTGGGGGAG TATTACAAAA AGGAGAACCC TTCGAACGAC GGGAAACCCA CCGTGCGACA GCTTGCGAAG GACTATAATT TACCCAACGC TAACAAACGT GAAAGTATGG GTATTTGTTT CGTCGGCAAA CGCCAATCGG GTTTCGGAGA CTTTCTACAC GAATACTTGC CACATCCGTT ACGTCCGTTG CAATTCGTGG ACGTCGATAC GGGTGCGGTA CTCCCCGCGC CGACACCGAA AAACGCCCAC GCTGTACTCT ACACCATAGG TCAAGGGGCC AAGATTTCCG GCGCGTCGGA GAAGTACTTT GTCGTGGACT CGGATGTCGC ACAGAATCGC GTCTTGGTAT GTGCCGGTAC GCATCATCCC GCACTGTACG CCGATTCATT GGTGCTAGAA ACCGTGTACT GGACGGCGGG AGAAATGCCG GGACCGTTGC AGAAACGCGG TCGATTGCGC TTACAATGTC GCATTCGACA CTTGCAGCCA CTGATAGATT GCGAATTGCG GGTGGAATTG GACGGATCAT TGACGGTTTA TTTCGACAAG GCTGTACGTG GGATCACTCC GGGTCAAACG GCCGCTTTCT ACGCCTTGGA CGGACTTCTC TGCCTTGGTG GTGGCCCGAT CGAGCGGCGT
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Protein sequence | RVVLALSGGV DSAVAAALLQ ETYGSSNNSD IGSAVLQTVH MSNWNSNTQD DDSIASCTSE QDWKDATAVA EHLRLNLTRQ HFEREYWNQV FEPYVNDILR GTMGNPDIGC NVHVKFGALR EFADWVLRWG WDQPPSPHYS HHNHQYQTPP PLLLAAADPS KDQSYFLSAC AGYQLSNVLF PLGEYYKKEN PSNDGKPTVR QLAKDYNLPN ANKRESMGIC FVGKRQSGFG DFLHEYLPHP LRPLQFVDVD TGAVLPAPTP KNAHAVLYTI GQGAKISGAS EKYFVVDSDV AQNRVLVCAG THHPALYADS LVLETVYWTA GEMPGPLQKR GRLRLQCRIR HLQPLIDCEL RVELDGSLTV YFDKAVRGIT PGQTAAFYAL DGLLCLGGGP IERR
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