Gene PHATRDRAFT_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3425 
Symbol 
ID7202896 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp616520 
End bp617869 
Gene Length1350 bp 
Protein Length394 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182101 
Protein GI219123581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.954409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGGTTGTCT TGGCCTTGTC GGGTGGGGTC GACTCGGCCG TGGCGGCGGC TCTTTTACAG 
GAAACCTACG GCAGCAGCAA CAATTCCGAC ATTGGTAGCG CGGTACTACA AACCGTGCAC
ATGTCCAACT GGAATTCCAA TACACAAGAC GACGATTCCA TCGCGTCGTG TACGTCGGAA
CAGGATTGGA AGGATGCGAC GGCGGTCGCG GAGCACTTGC GACTCAACCT GACACGACAG
CACTTTGAAC GTGAGTACTG GAATCAAGTC TTTGAACCGT ACGTGAACGA TATTTTACGG
GGAACTATGG GCAATCCCGA CATTGGCTGT AACGTGCACG TCAAATTTGG TGCCTTGCGC
GAGTTTGTCC GGCGAAGGTA CGGAAGGCAC CGACCACAAT CCGGAGCTCA TACTCCAGGA
GGAACCGAGC CACTGTTGGC GACGGGACAC TACGCTCGCC TCTGGCATCG GAATCGGGCT
GATTCTGCCA TGCCGTTGTA CGTGGAAGAA GCACTAGCCA CACATCATGA CGAGGCCGAC
TGGGTATTGC GTTGGGGATG GGACCAGCCT CCATCGCCGC ACTACTCGCA CCACAATCAT
CAGTACCAGA CGCCTCCTCC CTTGCTATTA GCCGCCGCGG ATCCCAGCAA AGATCAATCC
TACTTTTTGT CAGCCTGTGC CGGATACCAG CTATCAAACG TGCTCTTTCC TCTGGGGGAG
TATTACAAAA AGGAGAACCC TTCGAACGAC GGGAAACCCA CCGTGCGACA GCTTGCGAAG
GACTATAATT TACCCAACGC TAACAAACGT GAAAGTATGG GTATTTGTTT CGTCGGCAAA
CGCCAATCGG GTTTCGGAGA CTTTCTACAC GAATACTTGC CACATCCGTT ACGTCCGTTG
CAATTCGTGG ACGTCGATAC GGGTGCGGTA CTCCCCGCGC CGACACCGAA AAACGCCCAC
GCTGTACTCT ACACCATAGG TCAAGGGGCC AAGATTTCCG GCGCGTCGGA GAAGTACTTT
GTCGTGGACT CGGATGTCGC ACAGAATCGC GTCTTGGTAT GTGCCGGTAC GCATCATCCC
GCACTGTACG CCGATTCATT GGTGCTAGAA ACCGTGTACT GGACGGCGGG AGAAATGCCG
GGACCGTTGC AGAAACGCGG TCGATTGCGC TTACAATGTC GCATTCGACA CTTGCAGCCA
CTGATAGATT GCGAATTGCG GGTGGAATTG GACGGATCAT TGACGGTTTA TTTCGACAAG
GCTGTACGTG GGATCACTCC GGGTCAAACG GCCGCTTTCT ACGCCTTGGA CGGACTTCTC
TGCCTTGGTG GTGGCCCGAT CGAGCGGCGT
 
Protein sequence
RVVLALSGGV DSAVAAALLQ ETYGSSNNSD IGSAVLQTVH MSNWNSNTQD DDSIASCTSE 
QDWKDATAVA EHLRLNLTRQ HFEREYWNQV FEPYVNDILR GTMGNPDIGC NVHVKFGALR
EFADWVLRWG WDQPPSPHYS HHNHQYQTPP PLLLAAADPS KDQSYFLSAC AGYQLSNVLF
PLGEYYKKEN PSNDGKPTVR QLAKDYNLPN ANKRESMGIC FVGKRQSGFG DFLHEYLPHP
LRPLQFVDVD TGAVLPAPTP KNAHAVLYTI GQGAKISGAS EKYFVVDSDV AQNRVLVCAG
THHPALYADS LVLETVYWTA GEMPGPLQKR GRLRLQCRIR HLQPLIDCEL RVELDGSLTV
YFDKAVRGIT PGQTAAFYAL DGLLCLGGGP IERR