Gene PHATRDRAFT_29029 details

Gene Information

• Locus tag: PHATRDRAFT_29029
• ID: 7202934
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011682
• Strand: +
• Start bp: 801996
• End bp: 804219
• Gene Length: 2224 bp
• Protein Length: 574 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002181978
• Protein GI: 219123327

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCGGTTGCTA CTGGCGGTAA CCATTTTTAA CTCAATCGTC GTAGTAAATC TAATATATTC 
ATACCATCTG CGACAAGTAT TCAAGATATT TCGAGAGGAG GCCGCTATAC TTAATCGACC 
GTAGCTCGGA CGACCTGGGA AGCTCGACGT TTCTCGGTTG GGCTCCAGAT TTAGAATCTT 
TCCCTCATGT GGTTCTTCAA CATGGTTCTT TTTGCCGTCC TTTGCGGATC GTTTCGACAG 
CGAATAGTAC AAGCTTTTGT CCAGAAAAAT GTCTTTTTTG CTTCCTTAGC GGCGCGTGCC 
AAGAGTTCGG GATTAGGGGC AGTGGACGTC GGGACGCCGG CAACCGCTTT TGATGATGGC 
AAGCGTCCGT TTCAGATTAC AACGCCGATC TATTATGTGA ACGACAAACC GCACATCGGC 
CATGCCTACA CGTCCACTGG TGAGTTGCTT CGTTTTGAAT GCGATGCTGG TAGCCGTATC 
CACGTCCCGT CATTCACTCT CACACTCGAT ATATTCTGAA CCCATAGCGT GCGATGTGAT 
TGCACGATTC ATGAGGCTTT CCGGACGGGA TGTCTTTTTC CTCTCTGGAA CCGATGAACA 
CGGCGAAAAA GTGGAGCAAT CAGCCGAAAA GCAAAACATG GATCCGCAGG GCTTCGTAGA 
CCAAGTCTCG GTTAACTTTC GTGAGCTGTT AGAACTCATG AATATTTCCA ACGACAAGTT 
TATTCGTACC ACGAGCGAGG ATCATAAAAA GTCTGTTCAG GTACGTTTTG TCGAATGAGC 
TACTGCATTT TCTGGTCGCT CTTTGCACTC ACAGGGATTA AATACTATCT TGTACTACAC 
AGCACTTTTG GAATGTTATG GTCGAAAAAG GCTACATTTA TATGGGCACG TACTCTGGAT 
GGTATTCCGT CAGGGATGAA TGCTTCTATA CAGAATCGGA GCTGATCGAC GGCAAAGCCC 
CGACCGGAGC AGAAGTGTCC TGGGTAGCCA AAGAAGAATC ATATTTCTTT AAACTCAGCC 
AATTTGAAGA AAAATTGTTG GACCTTTACG AAAGAAATCC TCACTTTATT GCTCCAGAAT 
CACGAAAGAA CGAAGTTGTG AGCTTTGTCA AAGGTGGCCT GCGAGACCTA TCCATTAGTC 
GAACATCATT CAAATGGGGT GTACCAGTTC CTGACGACGA GGATCATGTC ATGTACGTTT 
GGGTAGATGC CTTGACGAAC TACATTTCAG CCCTGGGGTA CCCAGATATG GGCGAGGGAT 
CTGACTTCAG CAAGTTTTGG CCGGCCTCTA TCCATATTGT AGGCAAAGAT ATTCTGCGAT 
TTCATGCTGT CTATTGGCCG GCCATGTTGA TGGCCGCCGA ATTACCGCTT CCAAAGCGGT 
TATTTGCTCA TGGTTGGTGG ACGAAAGATG GTCAGAAGAT TTCCAAGTCC ATCGGCAACG 
TGATTGATCC TGTAGAATTG GTAAACAAGG TACGTTCATT TAGGTTTCAA TGATGAATAT 
TTCCTCCTTC TGCTGGTCTC TCAATGCCTA CTGATTGTCT GATCTGTGAT TTCTCTAGTA 
CGGGGTGGAC CAAACTCGGT TCTTTCTCAT GTCGGAAGTA AATTTTGGGA ACGATGGAGA 
TTTCTCGGAC AGAGCTATGA TCCAGAAGTG CAACACAAAT CTTGCGAATG AGCTTGGAAA 
CCTGTGTCAA AGAACACTTT CCCTGGTATT CAAAAACTGC GAAAAGGCCG TTCCTAACCC 
TGTCGGCGCG TACACACCAG AGGACGAGGC TTTGCTGGAA TCGGCCCGGA ATCTACGGAA 
CAAGGTAGCA ACCGAGATTT CCCAACAGTC TATTTTGAAA TACGTTCATG CCATGGTCGA 
AATGATTTGG GAAGCAAACA AATACATTGA CGAAATGGCG CCCTGGGCGC TGAAAAAGAC 
AGACCCGGAA CGGATGGCCA CTGTGTTGTA CGTTTTATTA GAAGTTCTTC GGTATTCAGC 
AATCCTTTAT CAACCGTTAA TTCCAGAATC GGCTGGAAAG ATTTTAGATC AGTTGACGGT 
ACCCGCAAAT GAACGCACGT TCCTGCATCT AAGTGAAGAA TACAGCATCA AGGCCGGTGC 
AGCGATTTCC AAACCTGTTG GAATATTTCC ACGAATCGAA ATGCCGGCGG ACGAGTTGGT 
AGAAGCATAG ATAACGTCAC TCTAAAATGG TTTTGACTGT GAATCTGAGT TACAGTGAGG 
TAGA 

 

Protein sequence

MWFFNMVLFA VLCGSFRQRI VQAFVQKNVF FASLAARAKS SGLGAVDVGT PATAFDDGKR 
PFQITTPIYY VNDKPHIGHA YTSTACDVIA RFMRLSGRDV FFLSGTDEHG EKVEQSAEKQ 
NMDPQGFVDQ VSVNFRELLE LMNISNDKFI RTTSEDHKKS VQHFWNVMVE KGYIYMGTYS 
GWYSVRDECF YTESELIDGK APTGAEVSWV AKEESYFFKL SQFEEKLLDL YERNPHFIAP 
ESRKNEVVSF VKGGLRDLSI SRTSFKWGVP VPDDEDHVMY VWVDALTNYI SALGYPDMGE 
GSDFSKFWPA SIHIVGKDIL RFHAVYWPAM LMAAELPLPK RLFAHGWWTK DGQKISKSIG 
NVIDPVELVN KYGVDQTRFF LMSEVNFGND GDFSDRAMIQ KCNTNLANEL GNLCQRTLSL 
VFKNCEKAVP NPVGAYTPED EALLESARNL RNKVATEISQ QSILKYVHAM VEMIWEANKY 
IDEMAPWALK KTDPERMATV LYVLLEVLRY SAILYQPLIP ESAGKILDQL TVPANERTFL 
HLSEEYSIKA GAAISKPVGI FPRIEMPADE LVEA