| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_29016 |
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| Symbol | OGD1 |
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| ID | 7202926 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011682 |
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| Strand | - |
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| Start bp | 764420 |
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| End bp | 768156 |
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| Gene Length | 3737 bp |
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| Protein Length | 1073 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | XP_002182131 |
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| Protein GI | 219123641 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.234207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CAGCAAACCA TCTCGTTCAA CTCCTAACCA CAAAGCGATA CCAAATTTGT CGTGTTGTCG
TCGGAATTGA AAGGGAAGCT CTCTATTCGT TCATCGTCTT GCTCTTCCGT GTTGGCGCTC
TCGTCGGCTG GTTTGGCTGT TTGGTTCGAG ATTCCGACAC AGTTTTGTGT AAGTGTCTCG
CTGAGTCATC TGGATTGCAG TAATTGAAAG TACCAACTGC ATTAGACAAA AGAATACTCT
CTCCATAATG TCGTCCGCCC GACAGCTTTT GCTCTTGTTG AAACGTCCAG GTCCGTGCCG
GAATCGTCCA TCTCCTTCAC GGCGCGTTCC TGATCCTGGC ACGTTGTCCC GATCCTTGTC
TCGTTCCCGT GTGGCGCAGC GAAGCCTGAG TACCAGCGCT GCCTCCAGTC TTACCGTGCA
CGAGAACGAA TCGTTCTTGA CGGGAACGTC CTCTGTCTAT GCGGAAGAAA TGTACGAAGC
CTACCTACGC GATCCTACCA GTGTGCACGA ATCATGGAAA CGCTACTTTG ACAATCTGGA
ACAGAGTGTG GCCTACAACG AAGCCGATTT CGCGTCCCCG ACCGCCGTAC CATCGCCCAA
GCCAGTCCGG GCATCGAGTA TGTCGATCGA AGCCGCTCCG TCGGATTCCC TAGCGGTAGC
ACATTTGATT CGATCCTACC AGGTCAACGG ACACTTGGCC GCGCAATTGG ATCCTCTTCA
TCTTCACACC CGCGAGGCAT TTCCCCAACG CCCTTCCAAT CTCAAGCCCG AGCTACTCAG
CAAGGACGGA TTCCCTCCCG AGCTTACTGC GGAACACTAC GGCTTTACGG AAGCCGACAT
GGATCGTCGT CTCGTCTTTC GTGGCGCCTC TTCCGGTGGA AACAAGGGCT ACTTGGAAGA
GCTCTCCAAT TCTCCCAACA AAGTCACGCT CCGCATGATC CTACAGGAAC TGCGCAAAAC
GTATTGCAAC ACGCTCGGTG TGGAATACAT GCACATTGGC GATATCGACA AGATGAACTG
GATTCGGGAA CGCGTCGAGA ATCCGCGATG GACGCGGTAC GATGTCGAAA AGAAAACACA
CATCTTTGAA CGTCTCTGCT TCGCCGATAG CTTTGAGAAT TTCTTGGCGC ACAAGTTCAA
TACCACCAAG CGCTTTGGTT TAGATGGGGG TGAAGCCATC GTCCCGGCTC TCAAAGACGC
CATTGATCGC GCGTCCGAGC TCGGGGCGCA CAGTTTCGTC ATCGGCATGC CCCACCGCGG
TCGACTCAAT ATTCTCGCCA ACGTCATGCG CAAACCCATG CCCCTTATCT TTTCCGAATT
CCAAGGCACC AACTATAATA TCAAAGATCA CCAAAAGAGT ACATCGGATG ATCACTGGGG
TATGTCGGGT GACGTCAAGT ACCATTTGGG TTCGTCAATG GACCGGACCT ATCCCGATGG
TCGACAAATT CATCTAAGTT TGGTCGCCAA TCCATCACAT TTGGAATGCG TCAACCCGGT
CGTGGCGGGT AAGGCTCGCG CCAAACAGTA CTACGGTGGA AACCGAGAAG AAGATATCCG
TAACGTTGTA CCGATCCTAT TGCACGGCGA CGCCGCCTTT GCCGGGCAAG GGGTGGTCTA
CGAGACCATG CAAATGGCCG AGGTGCCCGA TTTTGACGTC GGTGGAACCA TTCACGTCAT
CATCAACAAT CAGATTGGCT TCACCACCAA CCCCATTCAT TCGCGCTCGA CGCCCTACTC
GTCGGATTTG GGCAAGGCCT TCAATTGCCC CATCTTTCAC TGTAACGGCG ACGATCCCCT
AGCAGTGTCG ACGGCACTCG AGACCGCCGT CGAATGGCGT CACGAATGGG GCATGGATGT
TATTATCGAG ATGGTCTGCT ACCGTCGTAA CGGTCACAAC GAACTAGATC AGCCGGCCTT
TACACAACCA AAACTCTACA AGGAAATTTC TCGACACCCA CCAACCCTGG ATATTTTTGA
AAAGCGATTG ATTGAAGAAG GAACCTTGTC CAAAGAAGAA TGTCAAGAGA TCCGTGACTT
TACGCTGGAA AGCTACGAAA AGGATTTCGA AGCTTCCAAG ACGTATGTGA AAAAAGAGAC
GGATTGGTTG AGCTCCAGAT GGACCGGTTT CAAAGGGCCG TCGCAGATTA GTCGTATTCG
TCCTACCGGC GTGGAGGTTG AGACTCTGCG CAAGATAGGA ATCCAAGCTG GAACGGTTCC
AGCCGATTTT AAATTGCATC GTCAAATGGC CAAAATCTTC AAGGCGCGTC GGGAAATGGC
GGAAAATGGC GAAGGTATTG ACTGGGGCAC TGCCGAAGCC TTGGCGTTTG GTTCGCTCCT
ACTTGAAGGG AATCATGTGC GTATTACCGG TCAAGACGTT CAGCGCGGTA CCTTTAGTCA
CCGGCACGCC GTCGTCAAGG ATCAGAATAC CGAAGAGGAA TACACTCCAT TGAATTTTCT
CGCCAAAAAG ATGGCTCCAA GTGCCCCACT TGAAGAGCTG AGCAAGACGG ATACGCAAGC
CGGCTTCATT GCTCGTAATT CGATTCTTTC CGAGTTTGCT GTTCTTGGAT TTGAGCACGG
GTACAGTTTG GAAAACCCGA ACGCGCTCAT TTTATGGGAA GCCCAATTTG GTGACTTCGT
CAATGGCGCG CAAGTCTTGA TTGATCAGTT CATCTCGTCA GGTGAAGACA AGTGGTTGCG
CCAGTCTGGC CTTGTCATGC TGTTGCCCCA TGGGTACGAT GGACAAGGTG CCGAACACTC
TAGTTGCCGT GTGGAGAGGT TTCTGCAGCA AGTGGACGAA GATCCGCACT ACATTCCGCG
CTTGGCACGG GACGAACGTA TGCAAATTCA GCGCTGCAAT TGGCAAGTTG TCAATTGCAC
GACCCCGGCA AATTACTTTC ATTGTTTGCG CCGTCAGATT CATCGTGATT TCCGTAAGCC
ACTAGTAGTC GTAGCACCAA AGAACTTGCT TCGTCACAAG CGCTGCGTTT CGACCTTGGA
AGAAATGGGA CCAGGTACAT CCTTCAAGCG CGTCTACGAC GAGACTGATC CGGCAATAAG
CCATCATCCA GAGCAAGTCA AGACGCTGGT CTTTTGCACT GGGCAGATAT ACTACGAGCT
CCTGGCGGAG CGTGAAAAAT TAGGTCGTAC GGATGTGGCT CTGGTGCGTT TGGAACAAAT
TGCTCCATTC GCGTTCGATC GGATCGCGAA GAATGCGCAG AAATACCCCA ATGCCGAATT
GATTTGGGCC CAACAAGAAC CAAAGAATAT GGTACGGTTT TGGAAAGTCT TCCTTGCAAA
CAGAAAAATG GCATTTTCTA ACATGTCTTG CTTGTCTTTG TGCGCAGGGA GCCTATAGTT
ATGTATTGGC TCGTATCATG ACGGCGACGC GCGAATTAAA CGGCAACGAA AAACGCCCTC
GCTACGTAGG CCGCCCAGTC AGTGCGGCGC CAGCGACAGG CATGGGTAAA GTACATCAAA
TGGAATATAA CAACATCATG GCGGGAGTCT ATGGCGTGGC GGGAGATGGA GGTTTTGAGG
ACTAGAAATC AATGTTTAAG AGACAGTGCA AAAATCGAGT TTAATTTACA GCAAGTGTGT
CGCACACAAT GGTTTTGTAA GCAGAACGAA CATTTTCTAG GCGACAACTG ATTGCAAAAC
TGCTACAATG CCTTTCCAAA AAAAGAATGC GAAGAGCAGA CTCTGACAGT AATCTACTAA
CTGTAACTTG TTACATT
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| Protein sequence | MSSARQLLLL LKRPGPCRNR PSPSRRVPDP GTLSRSLSRS RVAQRSLSTS AASSLTVHEN
ESFLTGTSSV YAEEMYEAYL RDPTSVHESW KRYFDNLEQS VAYNEADFAS PTAVPSPKPV
RASSMSIEAA PSDSLAVAHL IRSYQVNGHL AAQLDPLHLH TREAFPQRPS NLKPELLSKD
GFPPELTAEH YGFTEADMDR RLVFRGASSG GNKGYLEELS NSPNKVTLRM ILQELRKTYC
NTLGVEYMHI GDIDKMNWIR ERVENPRWTR YDVEKKTHIF ERLCFADSFE NFLAHKFNTT
KRFGLDGGEA IVPALKDAID RASELGAHSF VIGMPHRGRL NILANVMRKP MPLIFSEFQG
TNYNIKDHQK STSDDHWGMS GDVKYHLGSS MDRTYPDGRQ IHLSLVANPS HLECVNPVVA
GKARAKQYYG GNREEDIRNV VPILLHGDAA FAGQGVVYET MQMAEVPDFD VGGTIHVIIN
NQIGFTTNPI HSRSTPYSSD LGKAFNCPIF HCNGDDPLAV STALETAVEW RHEWGMDVII
EMVCYRRNGH NELDQPAFTQ PKLYKEISRH PPTLDIFEKR LIEEGTLSKE ECQEIRDFTL
ESYEKDFEAS KTYVKKETDW LSSRWTGFKG PSQISRIRPT GVEVETLRKI GIQAGTVPAD
FKLHRQMAKI FKARREMAEN GEGIDWGTAE ALAFGSLLLE GNHVRITGQD VQRGTFSHRH
AVVKDQNTEE EYTPLNFLAK KMAPSAPLEE LSKTDTQAGF IARNSILSEF AVLGFEHGYS
LENPNALILW EAQFGDFVNG AQVLIDQFIS SGEDKWLRQS GLVMLLPHGY DGQGAEHSSC
RVERFLQQVD EDPHYIPRLA RDERMQIQRC NWQVVNCTTP ANYFHCLRRQ IHRDFRKPLV
VVAPKNLLRH KRCVSTLEEM GPGTSFKRVY DETDPAISHH PEQVKTLVFC TGQIYYELLA
EREKLGRTDV ALVRLEQIAP FAFDRIAKNA QKYPNAELIW AQQEPKNMGA YSYVLARIMT
ATRELNGNEK RPRYVGRPVS AAPATGMGKV HQMEYNNIMA GVYGVAGDGG FED
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