Gene PHATRDRAFT_29014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_29014 
SymbolFba3 
ID7202915 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp707216 
End bp708876 
Gene Length1661 bp 
Protein Length400 aa 
Translation table 
GC content54% 
IMG OID 
Productcytosolic class II aldolase 
Protein accessionXP_002181958 
Protein GI219123285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAGAACCAA CCAAAAAAGA GAACTGCAAT CTGCCGTTGC TTTCGTCTGT TTTCTCGACC 
GAATTCACTG TCAAGATACC GCTTCCTTAC AGTACTAGTA GTACTAGTAG TAGTGCAGGA
GAACTGACTT ACACAAATAA CAATGGCAAC CATTACTGAT CTCGTTCCTC CCGGTGTGGT
CACTGGTGAC AATCTCACGA CGCTTTTGGA GCATGCGCGA GCGAATGGAT ACGCGATTCC
CGCCGTCAAC TGTACCAGGT ACGTGGATTC ACGTCGTTCG TACCCAAAGA TTCGACGGGA
AATAGAGATT CCGGAAAGAC TGTTCGATCG TCTCGTCGAA AGAGGCCCTC AGATTGATCG
AGTTGCTCGT AGAGCGGGTT TTGGCTTACC TTCCTTCGTC TCGTGCGTGA CCTTACGGTA
ATTTCGAATT CTCACCCGAC TCTGGTTTTT CTCGCTCTCG TTTGTTTGCT AATTTGCGTG
CTTGTTTCGT TCATCCGTCC AGTTCTTCGA CGGCCAACGC TGTCCTTGAA GCCGGCCGCA
AGTCCAAATC CCCCGTCATT ATCCAGGTCT CCAACGGTGG TGGTTCCTTC ATGGCGGGAA
AGGGATACAA GGACGCCGAC TCGGCTACCG TCGGATCGGT CGCTTTGGCG GTACACGTGC
GTTCCGTCGC CAAGTACTAC GGAATCCCCG TCATCCTTCA TTCCGACCAC TGTGCCAAAA
AACTCCTGCC CTGGTTCGAC GGTATGTTGG CAGCGGACGA AGACTTTTTC GCCAAATACG
GAGAACCCCT CTTTGGATCC CACATGCTCG ATCTCTCCGA AGAACCGGAC GAGGAGAACA
TTGCCATTTG CGTCGAATAC TTCAAGCGCA TGGTGCCCAT GAAGATTTGG CTAGAAATGG
AAATCGGCAT TACGGGAGGA GAAGAAGACG GAGTCAACAA CGAGGACGTT GACCCCGACA
AGCTCTACAC TACCCCCGAA CAGGTGTACT CGGTCTACCA GGCCCTCTCC CAGGTGGGGG
ACATGTTCTC CATCGCCGCT GCTTTCGGCA ACGTCCACGG AGTCTACAAA CCGGGTAACG
TCAAACTCAG TCCGGAGCGA CTCGTTAAGC ACCAGGAGTA CACCAAGAAA ATGATCGACT
CCAGTCTGAC CCATCCCCTC TTCCTCGTCA TGCATGGCGG TTCCGGCAGC ACGGACGAAG
AAATCCAAAC CGCCGTCAAG GCCGGCGTCG TCAAGATGAA CATTGACACC GACACGCAGT
GGTCGTACTG GGACGGACTC CGCGGATTCG AAAAGGAAAA GCGCGACTAC TTGCAGGGAC
AGATCGGCAA TCCCACGGGC GCCGACAAGC CCAACAAGAA ATTCTACGAT CCCCGCGTCT
GGGTCCGCAA GGCCGAAGAG GCCATGGTGG TTCGCGTCAT GACCAGCTGC GAGAAACTGA
ACTCGGCCGG TACCTACGAA CCATCCAACG AACCGGGATC GCCGCAGTTG GGTCAGCCCT
TGAAGACGCC CAGTCCCGTC GTGCTCATGG CCGCCGGTGC CCTGGCCGGG TCCGCCGCCA
CGCTCTTGCT CAAGACCTTG GGCAAGTAGA AAAGACAAGC ACTTCGTAAC GTGCCTTGCG
TTTAGAGCCA AGGTCAAAGT CTTTTTTGTT TACGTGAAAG T
 
Protein sequence
MATITDLVPP GVVTGDNLTT LLEHARANGY AIPAVNCTSS STANAVLEAG RKSKSPVIIQ 
VSNGGGSFMA GKGYKDADSA TVGSVALAVH VRSVAKYYGI PVILHSDHCA KKLLPWFDGM
LAADEDFFAK YGEPLFGSHM LDLSEEPDEE NIAICVEYFK RMVPMKIWLE MEIGITGGEE
DGVNNEDVDP DKLYTTPEQV YSVYQALSQV GDMFSIAAAF GNVHGVYKPG NVKLSPERLV
KHQEYTKKMI DSSLTHPLFL VMHGGSGSTD EEIQTAVKAG VVKMNIDTDT QWSYWDGLRG
FEKEKRDYLQ GQIGNPTGAD KPNKKFYDPR VWVRKAEEAM VVRVMTSCEK LNSAGTYEPS
NEPGSPQLGQ PLKTPSPVVL MAAGALAGSA ATLLLKTLGK